Slut010547.1
Basic Information
- Insect
- Sialis lutaria
- Gene Symbol
- -
- Assembly
- GCA_949319165.1
- Location
- OX439238.1:12114997-12121393[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-11 6.5e-09 35.6 0.0 2 39 346 384 345 388 0.90 2 4 9.5e-13 4.3e-10 39.4 0.1 1 39 399 437 399 440 0.95 3 4 4.1e-18 1.8e-15 56.6 0.0 1 45 454 499 454 499 0.97 4 4 1.3e-18 6e-16 58.1 0.0 1 44 506 550 506 551 0.96
Sequence Information
- Coding Sequence
- ATGCCGCCACTGTTTGCTTCCAGAAGATGGGTCTCTGAAGGCTCACTGTTACGGACAGCTGATCAATTGAAAATCAAAGGGTTGTGTGACGTATCAGGAGAAAAGGAAGCGGACACGTATCCCTTCTATGACGACTCGCCAACGTTGCTTAAGAAAACAACGCAGTCGAAGATTTGTCGTCTCACACCCACCAAACGGCCATACGCGAGAGAGACTGGACTGAACAAGAGATTATTTTCGTCGGAACAAAGAAACTTTAGCAATAAAGACTTTACTGGTAGTTCGTCGTCGAACAGAACTGAATTCATCAGCGGCGACACAGACGGTGGTCACCAAAACCACCACAACAAGACGCTGAAGAGCGAACAGACTGCGGACTGTGGCGAGAGTGGCGGCGGTGAAGAGGACGGCGTTAACATGCCCGTCGTGACGCAGCAGCTCCAGGAGGCCGCGGTGGCTAACCAGCGCGCGGACGCGTGGTCGCCGGCACCGCCGGACGCGAGCGACGCCCACGGAACCCTTATCGCTACGCAAacCTTATTTCCAGGACATGTAGAGTTACCTCCAGAACCTCCAGCTCCGGCAGCAACGCCTGTACCTTGTTCTCCACAAGAACTGATGCAAACCGGTGGACATTTGGACCCATGCAGTCCTGCGACTCATCATGATCTTAgcgAATCGAATATGTCAACGGGCAGTTGTGGAGCGCTAGATGGAGGAGATGTGaaagtaaaatttgaaacattgCGATCTATAGATTCCCTGGATGCCTGCAGTAGTCACAGCGGTGAGTCCTCTGTGGCTGATTTGTCAGCGTCTGCTTCCATGCACACGACTATGATGATTACGCCTGAACTTCTTGGACTTATACCTAGTGAAACAGatatgaCTGAAGACCCAATGGGCCTCAATGGAATGAAGAGTAGTTCAAATGGCCATAATTCTCATGGTGGACACCATTCTGTCCATGTTGGAAATGGTGGCTCCAGCAGTCATTCTGGTAGTGGACACAATAGTGGGCCTAAAACATGGAGTCAAGAAGACATGGAGTTAGCTCTTGATGCTCTTCGAAACCACAATATGAGTTTAACGAAAGCATCAGCGACATATGGAATTCCGTCAACAACATTATGGCAGAGAGCTCATCGATTAGGAATCGATACACCAAAGAAAGAAGGACCTACTAAATCGTGGActgaagaaaatttaaattcggCTTTAGAGGCATTACGGACTGGCACTATTTCTGCAAATAAAGCTAGCAAAGCATATGgtaTACCAAGTAGTACGCTTTATAAAATAGCTCGCCGTGAAGGGATACGCTTAGCAGCACCTTTCAATGCAGCTCCCACTACCTGGTCTCCTGAAGACTTAGAGAAAGCATTAGAGTCGATACGTTCCGGACAAACGTCAGTGCAGAGAGCATCGACTGAGTTTGGCATTCCGACAGGAACACTGTATGGTAGATGTAAACGAGAAGGAATCGAGTTGTCAAGATCTAATCCGACTCCTTGGTCGGAGGATGCAATGGGGGAGGCTTTAGAAGCTGTTAGGGTCGGTCATATGTCCATAAATCAAGCAGCCATCCATTATAATTTACCATACTCATCGCTATACGGAAGATTTAAACGAGGAAAATATGAAACGGAGCCTCCTAATAGTAGCAATGATCATTCAAATGATCAAAGCAGTACAAGCAATATACCTGAACAACAAATGATGTACTCGAGCAGCTCGAATCAAGGTCAATCGAGTCAACAATCAGCACACAATATGGCCTCTGTACACAACATGGTTGCCACAACCAGTCAATACCAACATCAGAATATCAGTTGA
- Protein Sequence
- MPPLFASRRWVSEGSLLRTADQLKIKGLCDVSGEKEADTYPFYDDSPTLLKKTTQSKICRLTPTKRPYARETGLNKRLFSSEQRNFSNKDFTGSSSSNRTEFISGDTDGGHQNHHNKTLKSEQTADCGESGGGEEDGVNMPVVTQQLQEAAVANQRADAWSPAPPDASDAHGTLIATQTLFPGHVELPPEPPAPAATPVPCSPQELMQTGGHLDPCSPATHHDLSESNMSTGSCGALDGGDVKVKFETLRSIDSLDACSSHSGESSVADLSASASMHTTMMITPELLGLIPSETDMTEDPMGLNGMKSSSNGHNSHGGHHSVHVGNGGSSSHSGSGHNSGPKTWSQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPEDLEKALESIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYETEPPNSSNDHSNDQSSTSNIPEQQMMYSSSSNQGQSSQQSAHNMASVHNMVATTSQYQHQNIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01342913;
- 90% Identity
- iTF_01342913;
- 80% Identity
- -