Sful012215.1
Basic Information
- Insect
- Sialis fuliginosa
- Gene Symbol
- -
- Assembly
- GCA_961205875.1
- Location
- OY540817.1:12336732-12343933[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-11 6e-09 35.6 0.0 2 39 338 376 337 380 0.90 2 4 1e-12 3.9e-10 39.4 0.1 1 39 391 429 391 432 0.95 3 4 4.3e-18 1.7e-15 56.6 0.0 1 45 446 491 446 491 0.97 4 4 1.4e-18 5.5e-16 58.1 0.0 1 44 498 542 498 543 0.96
Sequence Information
- Coding Sequence
- ATGACTGGAGTGCGTGTGTCACTGTTACGGACAGCTGATCAATTGAAAATCAAAGGGTTGTGTGACGTATCAGGAGAGAAGGAAGCGGATACATATCCCTTCTATGACGACTCGCCAACGTTGCTTAAGAAAACTACGCAGTCGAAGATTTGTCGTCTCACACCCAGCAAACGGCCGTACGCGAGAGAGACTGGACTGAACAAGAGATTGTATTCGTCGGAACAAAGAAACTTTAGCAATAAAGACTTTACTGGTAGTTCGTCGTCGAACAGAACTGAATTCATCAGCGGCGACACAGACGGTGGTCAACAAAGCCACCAAAACAAGACGCTGAAAAGCGAGCAGACTGCGGACTGTGGCGAGAGTGGCGGCGGTGAGGAGGACGGCGTTAACATGCCCGTCGTGACGCAGCAGCTCCAGGAGGCCGCGGTGGCCAACCAACGCGCGGACGCGTGGTCGCCGGCGCCGCCAGATGCGAGCGATGCCCACGGAACGCTAATCGCTGCACAAacCTTATTTCCAGGACATGTAGAGTTACCTCCAGAACCTCCAGCTCCGGCAGCGACGCCTGTACCATGTTCTCCACAAGAACTGATGCAAACTGGCGGACATTTGGACCCGTGCAGTCCCGCGACGCACCACGATCTTAgcgAATCGAATATGTCGACGGGCAGTTGTGGAGCGTTAGATGGAGGAGATGTGAAAGTCAAGTTTGAAACTTTGCGATCTATAGATTCCCTGGATGCCTGCAGTAGTCACAGCGGTGAGTCCTCTGTGGCTGATTTGTCAGCGTCTGCTTCCATGCACACGACTATGATGATTACGCCTGAACTTCTTGGACTTATACCTAGTGAAACAGatatgaCTGAAGACCCAATGGGCCTCAATGGAATGAAGAGTAGTTCAAATGGCCATAATTCTCATGGTGGACACCATTCTGTCCATGTTGGAAATGGTGGCTCCAGCAGTCATTCTGGTAGTGGACACAATAGTGGGCCTAAAACATGGAGTCAAGAAGACATGGAGTTAGCTCTTGATGCTCTCCGAAACCACAATATGAGTCTAACGAAAGCATCAGCGACATATGGAATTCCGTCAACAACATTATGGCAGAGAGCTCATCGATTAGGAATCGATACACCAAAGAAAGAAGGACCGACTAAATCATGGActgaagaaaatttaaattcagCTTTAGAGGCATTACGGACTGGCACTATTTCTGCAAATAAAGCTAGCAAAGCATATGgtataCCAAGTAGTACGCTTTATAAAATAGCTCGCCGTGAAGGGATACGTTTAGCAGCACCCTTCAATGCAGCTCCCACTACCTGGTCTCCTGAAGACTTAGAGAAAGCATTAGAGTCGATACGTTCTGGACAAACGTCAGTGCAAAGAGCATCGACTGAGTTTGGAATTCCGACAGGGACATTATATGGTAGATGTAAACGAGAAGGAATCGAGTTGTCAAGATCTAATCCGACTCCTTGGTCGGAGGATGCAATGGGGGAGGCTTTAGAAGCTGTtcgGGTCGGTCACATGTCCATAAATCAAGCAGCCATCCATTATAATTTACCATACTCATCGTTATACGGAAGATTTAAACGAGGAAAATATGAAACGGAGCCTCCTAATAGTAGCAACGATCATTCAAATGATCAAAGCAGTACAAGCAATATACCCGAACAACAAATGATGTATTCGAGCAGCTCGAATCAAGGTCAATCGAGTCAACAATCAGCACACAATATGGCCTCTGTACACAACATGGTTGCCACAACCAGTCAATACCAACATCAGAATATCAGTTGA
- Protein Sequence
- MTGVRVSLLRTADQLKIKGLCDVSGEKEADTYPFYDDSPTLLKKTTQSKICRLTPSKRPYARETGLNKRLYSSEQRNFSNKDFTGSSSSNRTEFISGDTDGGQQSHQNKTLKSEQTADCGESGGGEEDGVNMPVVTQQLQEAAVANQRADAWSPAPPDASDAHGTLIAAQTLFPGHVELPPEPPAPAATPVPCSPQELMQTGGHLDPCSPATHHDLSESNMSTGSCGALDGGDVKVKFETLRSIDSLDACSSHSGESSVADLSASASMHTTMMITPELLGLIPSETDMTEDPMGLNGMKSSSNGHNSHGGHHSVHVGNGGSSSHSGSGHNSGPKTWSQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWSPEDLEKALESIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGHMSINQAAIHYNLPYSSLYGRFKRGKYETEPPNSSNDHSNDQSSTSNIPEQQMMYSSSSNQGQSSQQSAHNMASVHNMVATTSQYQHQNIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01343858;
- 90% Identity
- iTF_01343858;
- 80% Identity
- -