Basic Information

Gene Symbol
ct
Assembly
GCA_949319165.1
Location
OX439244.1:6451708-6463369[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.1e-28 5.4e-24 84.2 0.0 3 72 346 416 344 421 0.95
2 3 2.9e-32 3.1e-28 97.8 0.0 4 77 727 801 725 803 0.96
3 3 1.2e-30 1.3e-26 92.7 0.0 3 75 938 1011 936 1015 0.95

Sequence Information

Coding Sequence
ATGTTTTCGCTTCGTTGCCCATCGCTTCACGCAGAAACCTTCAAAGACGGACAGGCGTCTCATCATGTTAACCCATACatcgTTAATTTGATCGAGCAAGTACAGAGGTTGCAAAATAGTGTGACGTCGATCAAAGAATCCTCGCGAGCTCAAATCCAGAGGTTAGAAGAACAATTAGAACACAATAGACAACTTATATTAAGGTTGGAGTCTCGGCTAGATCAACAGCGCGACTACGACGACATCAAGCGTGAAATAACGATACTAAGAACGGGTGATATATCATCTTCCGCAAGTAACCAAGGAGAATCGAAACCATTGGACTTGCTATTGTTAGAAAGACAGAAAGCTTTACAACAATCGGAGAGTGCGAATTTTAAACCTCCGTCACCTGAAATTCAAGGTGTACCACCACCACCACCATCACAGACTCCCGACCAACCCCTTCAACCGTCCACTGCGTCCCCCGCGTCCTCGTCTCATTCACAGCAACAGTCCCTCCTGCCGCCGCCGCTGCAAAACGTTGAGCAGTTCGGTTCGTTTCTCGGAGAGGAGATTGTAGCCAACTGGCGACGAAGTCTGGAACGGACCATCTTGAGTCCTCACTCGACGCAACCGCCCTTACTGCAGTCACCACCCTCGGACGTGCCCGGCAAAGCTGTCACACCTGTGGCGGCAGACTCGAGCGAGAAGAGCACGGCCAGCACTCCAGTACCGGCTGACTCTGCTTCAGGACCTAGGGCCTCGCCCTCAGCGCCTCCGAAGAGCCCCTCGGAAGATAACAACAACCATCATGTGGCCAGcaataataatatgaatttaaatgCCGCAGCTATGTGCAACTTCCTGAGAGGAGAAGACAGTCTGAAGAGTCCGTTTAGGTTTGAAGAACACAGGACGTTTAGATTTGCCGATGAGCTTCTGCCCGCCGGCGCTATGGTCGGGAGACTTGGCGAGAGCCTTATTCCCAAAGGGGACCCGATGGAAGCACGACTGCAGGAGATGCTGAGGTACAATATGGACAAGTACGCGACGCAGAACCTTGACACGTTACATATCGCAAGACGCGTCAGAGAGCTGCTCTCGATACACAACATAGGTCAAAGACTGTTCGCTAAATACGTGTTAGGTTTGTCTCAAGGAACTGTGTCAGAGTTACTGTCAAAGCCTAAGCCTTGGGATAAACTGACCGAGAAAGGAAGAGATAGCTATAGAAAAATGCATGCGTGGGCATGCGACGACAACGCGGTCATGCTGCTGAAATCCTTGATCCCCAAAAAAGGCAAAGATACAGGCATGGGCCCGTACGGACGGAGCGATTCTGATATGACTGAAGAAAGAATTGCTCACATTTTAAACGAAGCAAGTCAACATATGATGAAACCAGAAGAAAGCCGTAGTCCCCGTGAAGAAGATTCCAAATCCCCTTCCATGTCACAATGTCCGAGTCCGTTCAGTAAAGAAGCAGCAAAGAAACTTAAGAAGTACGAGAATGATGATATACCTCAGGAGAAAGTACTTCGAATTTATCAAGAAGAGTTAACCAAATTAATGGGAAGAAGAATGGACGATATTAGAAATCCAAGAGAACATTTCACTAGTATGTTCTTTCCTCACATATTTAGCGGTGGTCTTCCAATGGATCGAGGTCAAGAGGACATGCGGATGGCTTTAGATGCTTACCATCGTGAAATAGCCAAATTAAATCAATGCCCAACACCTGGATCCATCCCTACGCTTCCAGGGCTACTTGCTTTGCAACAGCAGGCGTTAGCCCAACACAACCATTTAAATGGAGCTCAGGACTTATCTCTGCCCAAAGAAAAGTCTGTAAAGTTAATGAATGGGACACCGGACAGTGATCAAAAAGATTCCAAAGATGACTCCGATCAGAGTAGGCATTCGGGGAGCGCATTTAGTTTAGTAAGGCCTAAAATAGAACCTGGAGTTCCAACATCAAACACGAGTTCATCAGCCCCAAGCCCATTAGGAAACAGTATCCTCCCACCTACTGAAGAATTCACAGGAGCTGCTGCCGCTAGCCCGTTACAAAGAATGGCTTCCATTACAAACTCTCTCATATCTCAACCACCTGCTCAATCTCACCACACTCCTTCACAGCGTCCCCTCAAAGCTGTTTTACCGCCAATCACCCAGCAACAGTTCGATTTGTTCAATAACTTAAATACTGAAGACATAGTGAAAAAAGTAAAAGAACAATTAAGTCAATATTCCATCAGTCAAAGATTATTTGGAGAGTCAGTCTTAGGATTATCCCAAGGATCTGTTAGTGATCTTCTAGCAAGGCCTAAACCTTGGCATATGCTTACACAGAAAGGAAGGGAGCCGTTTATAAGAATGAAAATGTTCTTAGAAGATGATAATGCCGTTCACAAATTAGTTGCAAGCCAATATAAAATTGCGCCCGAAAAACTGATGAGAACTGgAGGCTATGGCGGAACAACATGTACATCGTTAACAAAATCATTACCACCACAACAAAAATTACTATCGGAAACGGCCGGACTTTTGAACAAAATGCAACAAGAAAATCAAACAGCCTTGTTACCACCTTCGTTACAACTTGGTCCTCCACCGAGCCAAATGCCTCAACCACCTCCACCTCCAATGATGTTAACCCCTCCAGGTTTACCTCCACATCACCCATTGAATCTCCAAAACCCCGATCAACTAAAGAAGAGTCAAAGTCCACACCCTATTCAACATTCACCAATGGCTCAACAAAATTCACAAATGAGACAGTTACATCAACATATCTCTCCTAGTGTCTATGAAATGGCAGCTCTTACGCAAGATCTTGACACTCAGACcattacaacaaaaataaaggAAGCCTTGCTTGCCAATAATATAGGACAAAAGATATTTGGTGAAGCTGTGTTGGGACTATCTCAGGGTTCTGTGAGTGAACTTCTCTCCAAACCAAAACCATGGCACATGTTGAGCATCAAAGGTAGAGAACCTTTTATTAGAATGCAGCTATGGTTAGCTGACGCGCACAACGTCGATCGTTTACAGGCGTTGAAAAATGAACGACGAGAAGCAAATAAACGCCGTCGTTCCACAGGACCTGGGGCTCATGATAACAGTTCTGACACGTCATCTAACGACACATCAGAGTTCTATCATTCCAATTCTCCAGGCCCGGGACCACCGTCAGCTAAAAAACAACGCGTCCTATTTTCCGAAGAACAAAAAGAGGCTTTACGACTCGCATTCCATTTGGATCCGTACCCAAATGTTGCAACAATCGAATTCTTAGCGGCTGAACTGAATCTGTCAAGTAGAACAATTACAAACTGGTTCCACAATCACAGAATGCGTTTAAAACAACAAGGTCCGCATGGAATTCCAAACGATATTCCCGTTCGGGACCAATCAGGAAATCAACCTCCCTTCGATCCTGTCCAATTTAGACTGCTGTTAAACCAAAGATTGCTAGAATTGCAAAAAGAGCGCATAGGGTTAGGGGGTGTACCTCTACCGTATCCACCGTACTTTGCAGCTAATTCCAATTTAGCTGCACTTATCAGTAGAGGGCTGTTACCGACTAATGACGTCGACATGACTGCTTTAAATAACGCCGTTAAAGAACAAATGAGTGGGTTAGATTTATCAATGACTTCTATGAAGCGCGAACCTTCGGGAGACTACGATGATGACGATTTAGAGAGTAATGTTGGATCCGAAGACTCGAACATGTCGGTAGGTAGTTTACATGgtgaaataaaaacagaaccAAAAGAACTACCTTCTTCACAAATCGGAAACACGCCAAGAAGTTCGAGGAGAAAGCCAGCAGCTCCACAGTGGGTGAATCCCGAATGGCAAGACGAAGTCAAAGATAAGGCAGCTAACGGAGATGAAGTGATAATTAACGGTGTGTGTGTAATGCAGACTGAAGATTACGGACGGATGAATCCAGAAGAGACTGTGCGAGTGGAACCTACTCCCGTCATGGATAGGTTTGACGATGACCGCAGCGACGCTTCCAGCGAGAGCGGTCACGATGAAACTGGAAATGATAACCAAAGTCCTACTGAGACTGAGAATAAAGTCGATGATGAAAATACCGACAAATTAGACTGTGTACAAGATCAGTGTGAACCGCAACTCAAGAAGGAAAACATGAAAACAGAAAATGAAGAAGAGAGATGGGAGTATTAA
Protein Sequence
MFSLRCPSLHAETFKDGQASHHVNPYIVNLIEQVQRLQNSVTSIKESSRAQIQRLEEQLEHNRQLILRLESRLDQQRDYDDIKREITILRTGDISSSASNQGESKPLDLLLLERQKALQQSESANFKPPSPEIQGVPPPPPSQTPDQPLQPSTASPASSSHSQQQSLLPPPLQNVEQFGSFLGEEIVANWRRSLERTILSPHSTQPPLLQSPPSDVPGKAVTPVAADSSEKSTASTPVPADSASGPRASPSAPPKSPSEDNNNHHVASNNNMNLNAAAMCNFLRGEDSLKSPFRFEEHRTFRFADELLPAGAMVGRLGESLIPKGDPMEARLQEMLRYNMDKYATQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKGKDTGMGPYGRSDSDMTEERIAHILNEASQHMMKPEESRSPREEDSKSPSMSQCPSPFSKEAAKKLKKYENDDIPQEKVLRIYQEELTKLMGRRMDDIRNPREHFTSMFFPHIFSGGLPMDRGQEDMRMALDAYHREIAKLNQCPTPGSIPTLPGLLALQQQALAQHNHLNGAQDLSLPKEKSVKLMNGTPDSDQKDSKDDSDQSRHSGSAFSLVRPKIEPGVPTSNTSSSAPSPLGNSILPPTEEFTGAAAASPLQRMASITNSLISQPPAQSHHTPSQRPLKAVLPPITQQQFDLFNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGTTCTSLTKSLPPQQKLLSETAGLLNKMQQENQTALLPPSLQLGPPPSQMPQPPPPPMMLTPPGLPPHHPLNLQNPDQLKKSQSPHPIQHSPMAQQNSQMRQLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADAHNVDRLQALKNERREANKRRRSTGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFHLDPYPNVATIEFLAAELNLSSRTITNWFHNHRMRLKQQGPHGIPNDIPVRDQSGNQPPFDPVQFRLLLNQRLLELQKERIGLGGVPLPYPPYFAANSNLAALISRGLLPTNDVDMTALNNAVKEQMSGLDLSMTSMKREPSGDYDDDDLESNVGSEDSNMSVGSLHGEIKTEPKELPSSQIGNTPRSSRRKPAAPQWVNPEWQDEVKDKAANGDEVIINGVCVMQTEDYGRMNPEETVRVEPTPVMDRFDDDRSDASSESGHDETGNDNQSPTETENKVDDENTDKLDCVQDQCEPQLKKENMKTENEEERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01050269;
90% Identity
iTF_01342789;
80% Identity
iTF_01343832;