Basic Information

Gene Symbol
ct
Assembly
GCA_961205875.1
Location
OY540818.1:5069839-5081549[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.2e-28 5.2e-24 84.2 0.0 3 72 371 441 369 446 0.95
2 3 3e-32 2.9e-28 97.8 0.0 4 77 752 826 750 828 0.96
3 3 1.2e-30 1.2e-26 92.6 0.0 3 75 963 1036 961 1040 0.95

Sequence Information

Coding Sequence
ATGTACAACGCGATCCGTGATTTGAGGAAACATCAAAAGCTGCCAACGACAACAGACGGTTCATTTGTAGTGGTGGCATTGACAAAACACCCACCCTTTCTGTCAAATGAAGACGAACTCTGCACTCGCGATAAAAGGGGTAAAAGAGGAGAAATCGTTAATTTGATCGAGCAAGTACAGAGGCTGCAAAACAGTGTAACGTCGATCAAAGAATCCTCGCGAGCTCAAATTCAGAGGCTAGAAGAACAATTAGAACACAATAGACAACTTATACTAAGGTTGGAGTCTCGGCTAGATCAACAGCGCGACTACGACGACATCAAGCGTGAAATAACGATACTAAGAACGGGTGATATATCATCTTCCGCAAGTAACCAAGGAGAATCGAAACCGTTGGACTTGCTATTGTTAGAAAGACAGAAAGCTTTACAACAATCGGAGAGTGCGAATTTTAAACCTCCGTCGCCTGAAATTCAAGGTGTACCACCACCACCACCATCACAGACTCCCGACCAACCCCTTCAACCGTCCACTGCGTCCCCCGCGTCCTCGTCTCATTCACAGCAACAGTCCCTCCTGCCGCCGCCGCTGCAAAACGTTGAGCAGTTCGGTTCGTTTCTCGGGGAGGAGATTGTAGCCAACTGGCGGCGAAGTCTGGAACGGACCATCTTGAGTCCTCACTCGACGCAACCGCCCTTACTGCAGTCACCGCCCTCGGACGTACCCGGCAAGGCTGTCACTCCCGTTGCGGCGGACTCGAGCGAGAAGAGCACAGCCAGCACTCCGGTACCGGCCGACTCTGCTTCAGGACCGAGGGCTTCGCCCTCAGCGCCTCCGAAGAGTCCCTCGGAAGATAACAACAACCATCATGTGGCTAgcaataataatatgaatttaaatGCCGCAGCTATGTGCAACTTCCTGAGAGGAGAAGACAGTCTAAAGAGTCCGTTTAGGTTTGAAGAGCATAGGACGTTCAGATTCGCCGATGAGCTTCTGCCCGCCGGTGCAATGGTCGGGAGACTTGGCGAGAGCCTTATCCCCAAAGGGGATCCGATGGAAGCACGACTGCAGGAGATGCTGAGGTACAACATGGACAAGTACGCGACGCAGAACCTCGACACGTTACATATCGCCAGACGCGTCAGAGAGCTGCTCTCAATACACAACATAGGTCAAAGACTGTTCGCTAAATACGTGTTAGGCTTATCTCAAGGAACTGTGTCAGAGTTACTGTCAAAGCCTAAGCCTTGGGATAAACTGACCGAGAAAGGAAGAGATAGCTATAGAAAAATGCATGCGTGGGCATGCGACGACAACGCGGTCATGCTGCTGAAATCCTTGATCCCCAAAAAAGGCAAAGATACAGGCATGGGCCCGTACGGACGGAGCGATTCTGATATGACTGAAGAAAGAATTGCTCACATTTTAAACGAAGCAAGTCAACATATGATGAAACCAGAAGAAAGCCGTAGTCCTCGTGAAGAAGATTCCAAGTCCCCTTCCATGTCACAATGTCCGAGTCCGTTCAGTAAAGAAGCAGCAAAGAAACTTAAGAAGTACGAGAATGATGACATACCTCAGGAGAAAGTACTTCGAATTTATCAAGAGGAATTGACCAAATTAATGGGAAGAAGAATGGACGATATTAGAAATCCAAGAGAACACTTCACTAGTATGTTCTTTCCTCACATATTTAGCGGTGGTCTTCCAATGGATCGAGGTCAAGAGGACATGCGAATGGCTTTAGATGCTTACCATCGCGAAATAGCCAAATTAAACCAATGCCCAACACCTGGATCCATCCCTACGCTTCCAGGGCTACTTGCTTTACAACAGCAGGCTTTAGCCCAACACAACCATTTAAATGGAGCTCAGGACTTGTCTCTGCCCAAAGAAAAGTCTGTAAAGTTAATGAATGGGACACCGGACAGTGATCAAAAAGATTCCAAAGATGATTCCGATCAAAGTAGGCATTCGGGGAGTGCGTTTAGTTTAGTAAGGCCTAAAATAGAACCTGGAATTCCAACATCAAATACGAGTTCATCAGCCCCAAGTCCGTTAGGAAACAGTATCCTCCCACCTACTGAAGAATTCACAGGAGCTGCTGCAGCTAGCCCGTTACAAAGAATGGCTTCCATTACAAACTCCCTCATATCTCAACCACCTGCTCAATCTCACCACACTCCTTCTCAGCGTCCTCTCAAAGCTGTTTTACCGCCAATTACCCAGCAACAGTTCGATTTGTTCAATAACTTAAATACTGAAGACATAGTGAAAAAAGTAAAAGAACAATTAAGTCAATATTCCATCAGTCAAAGATTATTTGGAGAATCGGTCTTAGGATTATCCCAAGGATCTGTTAGTGATCTTCTAGCAAGGCCTAAACCTTGGCATATGCTTACACAAAAAGGAAGGGAACCGTTCATAAGAATGAAAATGTTCTTGGAAGATGATAATGCAGTTCACAAATTAGTCGCAAGCCAATATAAAATTGCCCCTGAAAAACTGATGAGAACTGGAGGCTATGGCGGAACTACATGCACATCGTTAACAAAATCATTACCcccacaacaaaaattactGTCGGAAACGGCCGGACTTTTGAACAAAATGCAACAAGAAAATCAAACAGCCTTGTTACCACCTTCATTACAACTTGGTCCTCCACCGAGCCAAATGGTTCAACCTCCTCCACCTCCAATGATGTTAACCCCTCCAGGTTTACCTCCCCATCACCCATTAAATCTCCAAAACCCCGAACAACTGAAGAAGAGTCAAAGCCCACACCCCATTCAACATTCACCAATGGCTCAACAAAATTCACAAATGAGACAATTACATCAACATATCTCTCCTAGTGTCTATGAAATGGCAGCTCTTACGCAAGATCTTGACACTCAAactattacaacaaaaataaaggAGGCCCTGCTTGCCAATAATATAGGACAAAAGaTATTTGGTGAAGCTGTGTTGGGACTATCTCAAGGTTCTGTGAGTGAACTTCTCTCCAAACCGAAACCATGGCACATGTTGAGCATCAAAGGTAGAGAACCTTTTATTAGAATGCAGCTATGGTTAGCTGACGCGCACAACGTTGACCGTTTACAGGCGTTGAAAAATGAAAGACGAGAAGCAAATAAACGTCGTCGTTCTACAGGACCTGGGACTCATGATAACAGTTCTGACACGTCATCTAACGACACATCAGAGTTCTATCATTCCAATTCTCCAGGCCCGGGACCACCGTCAGCTAAAAAACAACGCGTCTTATTTTCCGAAGAACAAAAAGAGGCTTTACGACTCGCATTCCATTTGGATCCATACCCAAATGTTGCAACAATCGAATTCTTAGCGGCCGAACTGAATCTGTCGAGTAGAACAATTACAAACTGGTTCCACAATCACAGAATGCGTTTAAAACAACAAGGTCCGCATGGAATTCCAAACGATATTCCCGTTCGGGACCAATCAGGAAATCAACCTCCCTTCGATCCTGTCCAATTTAGACTGCTGTTAAACCAAAGATTGCTAGAATTGCAAAAAGAGCGCATAGGGTTAGGGGGTGTACCTCTACCGTATCCACCGTACTTTGCAGCTAACTCCAATTTAGCTGCACTAATCAGTAGAGGGCTGTTACCGACTAATGACGTCGACATGACTGCTTTAAATAACGCCGTTAAAGAACAAATGAGTGGGTTAGATCTATCAATGACTTCTATGAAGCGCGAACCTTCTGGAGACTACGACGACGACGATTTGGAGAGCAATGTTGGATCCGAAGACTCGAACATGTCGGTAGGCAGTTTACACGGTGAAATAAAAACAGAACCAAAAGAACTACCTTCTTCACAAATCGGAAACACGCCGAGAAGTTCGAGGAGAAAGCCAGCAGCTCCACAGTGGGTGAATCCCGAATGGCAAGACGAAGTGAAAGATAAGGCAGCTAACGGAGATGAGGTGATAATTAACGGAGTATGTGTAATGCAGACTGAAGATTACGGACGGATGAATCCAGAAGAAACCGTGCGAGTTGAGCCTACTCCCGTCATGGATAGGTTTGACGACGACCGCAGCGACGCTTCTAGCGAAAGCGGTCACGATGAAGCTGGAAATGATAACCAAAGTCCCACTGAGACTGAGAACAAAGTCGATGATGAGAATACTGACAAATTAGACTGTGTACAAGATCAGTGTGAGCAACAACTCAAGAAGGAAAACATGAAAACAGAAAACGAGGAAGAGAGATGGGAGTATTAA
Protein Sequence
MYNAIRDLRKHQKLPTTTDGSFVVVALTKHPPFLSNEDELCTRDKRGKRGEIVNLIEQVQRLQNSVTSIKESSRAQIQRLEEQLEHNRQLILRLESRLDQQRDYDDIKREITILRTGDISSSASNQGESKPLDLLLLERQKALQQSESANFKPPSPEIQGVPPPPPSQTPDQPLQPSTASPASSSHSQQQSLLPPPLQNVEQFGSFLGEEIVANWRRSLERTILSPHSTQPPLLQSPPSDVPGKAVTPVAADSSEKSTASTPVPADSASGPRASPSAPPKSPSEDNNNHHVASNNNMNLNAAAMCNFLRGEDSLKSPFRFEEHRTFRFADELLPAGAMVGRLGESLIPKGDPMEARLQEMLRYNMDKYATQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKGKDTGMGPYGRSDSDMTEERIAHILNEASQHMMKPEESRSPREEDSKSPSMSQCPSPFSKEAAKKLKKYENDDIPQEKVLRIYQEELTKLMGRRMDDIRNPREHFTSMFFPHIFSGGLPMDRGQEDMRMALDAYHREIAKLNQCPTPGSIPTLPGLLALQQQALAQHNHLNGAQDLSLPKEKSVKLMNGTPDSDQKDSKDDSDQSRHSGSAFSLVRPKIEPGIPTSNTSSSAPSPLGNSILPPTEEFTGAAAASPLQRMASITNSLISQPPAQSHHTPSQRPLKAVLPPITQQQFDLFNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGTTCTSLTKSLPPQQKLLSETAGLLNKMQQENQTALLPPSLQLGPPPSQMVQPPPPPMMLTPPGLPPHHPLNLQNPEQLKKSQSPHPIQHSPMAQQNSQMRQLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADAHNVDRLQALKNERREANKRRRSTGPGTHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFHLDPYPNVATIEFLAAELNLSSRTITNWFHNHRMRLKQQGPHGIPNDIPVRDQSGNQPPFDPVQFRLLLNQRLLELQKERIGLGGVPLPYPPYFAANSNLAALISRGLLPTNDVDMTALNNAVKEQMSGLDLSMTSMKREPSGDYDDDDLESNVGSEDSNMSVGSLHGEIKTEPKELPSSQIGNTPRSSRRKPAAPQWVNPEWQDEVKDKAANGDEVIINGVCVMQTEDYGRMNPEETVRVEPTPVMDRFDDDRSDASSESGHDEAGNDNQSPTETENKVDDENTDKLDCVQDQCEQQLKKENMKTENEEERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01050269;
80% Identity
iTF_01342889;