Sful015904.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sialis fuliginosa
Gene Symbol
-
Assembly
GCA_961205875.1
Location
OY540821.1:2559022-2576137[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00023 0.012 16.1 3.0 2 23 156 177 155 177 0.98
2 16 7.8e-06 0.00042 20.7 1.6 2 23 184 205 183 205 0.97
3 16 0.0012 0.065 13.9 2.0 1 23 214 236 214 236 0.96
4 16 6.7e-06 0.00036 20.9 0.3 1 23 310 332 310 332 0.99
5 16 1.5e-05 0.00082 19.8 5.0 2 23 339 360 338 360 0.97
6 16 0.00025 0.014 16.0 2.3 2 23 377 399 376 399 0.96
7 16 0.0011 0.058 14.0 6.9 1 23 459 481 459 481 0.97
8 16 0.0051 0.28 11.9 4.0 1 23 487 510 487 510 0.95
9 16 3.7e-06 0.0002 21.8 0.5 1 23 515 537 515 537 0.98
10 16 2.4e-06 0.00013 22.4 4.5 1 23 550 572 550 572 0.97
11 16 3.5e-07 1.9e-05 25.0 2.7 1 23 579 601 579 601 0.97
12 16 2.1e-06 0.00011 22.5 1.6 3 23 613 633 611 633 0.96
13 16 0.00012 0.0065 17.0 4.4 1 23 639 661 639 661 0.99
14 16 1.1e-05 0.00058 20.3 1.5 1 23 667 689 667 689 0.96
15 16 7.4e-08 4e-06 27.1 0.2 1 23 695 717 695 717 0.99
16 16 0.00023 0.012 16.1 0.1 1 23 723 747 723 747 0.92

Sequence Information

Coding Sequence
ATGGAAGAAACTGAAAAAAGTAATCATCCGATACAAATAGATAAGCTTTGTCGTTCGTGTATGAACGAGAAAAACAACATGCAGTCGATTTTCGGTGAGCTCGAAATGGCGGGCCAGCAAGCCCAACTCTCAGAGATGCTTATGGCATGTGCCGCTGTGcagGTAATCTGCGATGATGGACTACCAGATGTAATCTGCGAGACCTGCGTCAGCCAACTAAGCAACGCGTACACATTCAAACAGCAATGCGAGAACACGGACAAGAAACTGCGCGAGTTCGCCAACATGCCGCCGTTATCGAACATAAAAGTAGAACGCAACGATGCAGAAGCTCTAAGCATAGTCGTGAAACCCGATATAGACATCATGTCGGAAATGATATACGATGACGACTCGAACTTCCAAGGGCGATCGGACTCTGACACTGAATGGAACGAGAAATCCAAGAAGAAACTGCATCCCAACCAGTGCAAGTTCTGTAACAAGAAGCTGTCGTCTCGCCAAGGCCTCAAGATTCATATGAGAAAACATACCGGCGAGAATTTGAAGGTGTGTCCTATTTGCAATGCAAGCTTTACAAAAACAAACCATTTGAACAGGCATATGCAGATACATACGAGAAAGGCGAATGAAAAATCACACGTCTGTTCAATTTGCGGTGCTGGATTCAACAAAGCATTTCAtttactaaaacataaacaagaaCACAAGACGTCCAAGAATGGCGAGAAGGAAACAGAAAATAAAGATATTACCGAAACTCCTGTAACTGAAGGCGAACCTACTATTAAATCGGAATTTGAAAACACCGAATTGATTATAAAGTCAGACGATGATGTCGGTATGGATGATATCGGTATGGACGATGATGATGGGTTTAACGATCTCCCGGACCCTGTGAAATATGTACGGAAAGATAAAGGCACTTACGAGTGTAAGATTTGTCAGAAAATACTTACGACGGCTACGGGATTGCAAATTCATATGAGGCGACATACTGGACATAATCTTTCTCAGTGTTATgttTGTAACAAATCGTTTACAAAAACAAGCCACCTAAAACGGCATTTATCGACACACGGTGCTGCCGTCGAAGCCGCGCAGACCAAGCCGGCGAAAGTGAGCCTCCCGTGCGAGTTCTGCGACCGCAAGTTCGTCTACCGCAAGAGCTTCGTGCACCACATGCGCTCGGAGCACGGCATATCGGACGACGAGAACATACCGCTGAGCGCGTACATCAAGACCGAGATGAAGGAAGATGAGCAGCGCAAGGAGAACAGCGAGACGGTCGACGGGCTGGTCGCCGCGGCTGACGGTGCTCTAGAGGATGAAGGGCCGGACGAGATCGACGAACTGACCGGCCAGAAGAAGGTGTTCGAGTGCCACGTGTGCCAGCACCAGTTTGGTCGTTCGAACCATCTGACGAGACACATGACACTGCATCGTAACGTCCTGAAACACAAGTGTGATAATTGCGAGAAGTCGTTTTTGACAGAGGAGCATCTCCAGAAACATGTGCAGGAATTCCATCTAGACAGACCATACATTTGCACTATCTGTAATAAACCATTTGCTCGGGGTGAGCATTTGATTCGGCATCTAAAAGTGCATGATAAAGATAAGAAAGATGGTGCAGAAACGTTAGAACATAAATGTTCTATTTGCGATAAGATATTTACAAgGAGCGATCATCTGGCAAGACACACGAAACTCCACCTAATGAAAGACAAGAGACACGTCTGCACTGTGTGCAATAAGTCATTCAACCGCTTAGACAACTTACGAACTCACCAGAGAGTTCACACGGGCCAGAGGGACCCCGTGAGACTGCATCTGTGCGTCTACTGCGGTAAAGAATTCAACAACTCCAGTAACATGATCGTCCATATGCGACGGCATACAGGAGAAAGACCGTATAAATGCACCGTCTGCGGGAAAGGCTTCCCGCGATCCCACGACCTCAAGTGTCACGAGAGAACTCATTCCGGAGAAAGGCCGTATCTGTGTACACTCTGCGGTAAATCGTTCAACAAGAGCAACAAACTGGTGCGCCACACCCGAGTCCACACAGGAGAGAGGCCGTACGTGTGTAACATATGCGGGCGTGCGTTCACGCAATCCAACGACCTGGCGCTGCATATGCGTAGGCACACAGGGTCCAGGCCGTATGCGTGTGGAGTCTGTCCAGCCAGGTTCATTCAGTCCGGACAGCTCAAGGCTCACAGGCGTTCGCAGGGCCATTGGGTCGAACAAGAAATCCAATTCCGAGGAAACCGCGTCGAGCCCGTTCACATAGAAGGCTTGGTAGAGACCCCGATAAAACACAGGAACCGTGTCAAAAACATCGTCAAGCAAGAGCTTACAGTCATGCCCGAGGTGTTCGCAAACACATCGCTTCTAGCGTTAGCCACCGGCAGCAACGTGCCTCCGCCTAAAGATTTCAGAATCATACCGCATGTCGAGAACGAGATAAAACCTACGACAAGTGCCACGGATGGGTTCCACGTGGCGACGGTGACACAGTCGTACCAGCCGAGCGCCACGACTAGCGCGGGGCCATTTACAACTAGTGAGAGTTTTAATTTTCAGCAGTATGATTCGGTAATGTAA
Protein Sequence
MEETEKSNHPIQIDKLCRSCMNEKNNMQSIFGELEMAGQQAQLSEMLMACAAVQVICDDGLPDVICETCVSQLSNAYTFKQQCENTDKKLREFANMPPLSNIKVERNDAEALSIVVKPDIDIMSEMIYDDDSNFQGRSDSDTEWNEKSKKKLHPNQCKFCNKKLSSRQGLKIHMRKHTGENLKVCPICNASFTKTNHLNRHMQIHTRKANEKSHVCSICGAGFNKAFHLLKHKQEHKTSKNGEKETENKDITETPVTEGEPTIKSEFENTELIIKSDDDVGMDDIGMDDDDGFNDLPDPVKYVRKDKGTYECKICQKILTTATGLQIHMRRHTGHNLSQCYVCNKSFTKTSHLKRHLSTHGAAVEAAQTKPAKVSLPCEFCDRKFVYRKSFVHHMRSEHGISDDENIPLSAYIKTEMKEDEQRKENSETVDGLVAAADGALEDEGPDEIDELTGQKKVFECHVCQHQFGRSNHLTRHMTLHRNVLKHKCDNCEKSFLTEEHLQKHVQEFHLDRPYICTICNKPFARGEHLIRHLKVHDKDKKDGAETLEHKCSICDKIFTRSDHLARHTKLHLMKDKRHVCTVCNKSFNRLDNLRTHQRVHTGQRDPVRLHLCVYCGKEFNNSSNMIVHMRRHTGERPYKCTVCGKGFPRSHDLKCHERTHSGERPYLCTLCGKSFNKSNKLVRHTRVHTGERPYVCNICGRAFTQSNDLALHMRRHTGSRPYACGVCPARFIQSGQLKAHRRSQGHWVEQEIQFRGNRVEPVHIEGLVETPIKHRNRVKNIVKQELTVMPEVFANTSLLALATGSNVPPPKDFRIIPHVENEIKPTTSATDGFHVATVTQSYQPSATTSAGPFTTSESFNFQQYDSVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01344210;
90% Identity
iTF_01344210;
80% Identity
-