Sbem007878.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- PAXBP1
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000270.1:237122-245885[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-16 1.1e-12 48.5 0.1 2 158 130 268 129 308 0.72 2 2 1.2 9.4e+03 -3.7 0.0 44 64 402 423 387 427 0.66
Sequence Information
- Coding Sequence
- ATGCCGGAGTTGGAGGCGCTAGAAGCGCGCGCTCTGGCGCTTCACCGCTGGCGCTGCGAGGTGGTGGTAGAACGCCGTCGCGCCGACGTGCGCGACCAGGCACAAGACGTGCTCGCACATGCAGCTCGCCCCGGCGCCGCGAAGCCAGTGGAGTCCGAGGAGAAGACTCGTCGTACGGCGGAGCGCGAGGGGCGGCGGCGCGCGCGGCGGCTGCGGCGCGAGGCGGCCGCCGCGCCGTCGGGCGCGCCGCCGCGGCACCGCGACGGCGACTCCAGCGACGACGAGCTGCCGCCCGCCAGCCAACACCACTACCGGCATGAGAGAGAGTGTATTCGCGAGGCATCATCGTCGCTGTTCGCGGACGCGCTCCCCGCGTGGCGCAGCGTGCGCGGCGTGAGCGCGCGGCTGGCGCGGTGGCGGCGCCGCGCGCCCGCGCTCTACACCGACGCGTACGTCGCGCACTGCCTGCCCAAGCTGATCGCGCCCTACATCAGGCAACAGCTGATCCTATGGAATCCTTTGGCAGACGAAGATAATGAAGACTACGAAAGGATGGACTGGTACAAATGTCTGATGATGTACGGCGTCCGTTCGGAGCAAATAGAAGGCGATTCGGAAGACTCTGATAGCGAGGCGGAACAAAATGGCGACGTGAGCGTCACGGAGTCTTCTGTCCGAGAAGACCTGGACCTGTATCTGGTGCCCACCATTGTTAATAGGGTCGTCATACCCAAGCTTACAGAGTTGGTGGAGTACGCGTGGGACCCGGTGTGCGTGCGCTCGTGCGTGCGCCTGCGCGCGCTACTAGTTCGCGCTTGTGCACAGCCAGATGCCGGCGCCGCCCTGCGGCGACTCGCCGGGCGCACCACCGCGCGACTCGCCGCCGCGCTCAACGCGGACGTGTTCCTACCCGCACTACCTCCTCAGGTGATGGAGGGTGTCGGCGGCGCGTTCTGGCGCCGGTGCCTGGGCGCGGGAGTGCGGCTGCTGCGCGCCGCGCTCGCGCTCACCGCGCCGCCGCCCGCGCTGCGCGCCGACCCCATCGTGCTCGCGCTCATCGACACGCTGTGCACGGCGGCCGGCGCGGCGCCGTCGACGGCGGCCGCGGCCGCGGCGGCCGCGCTCGCGGACACGCTGCCACGTGGCGGCGCTCTACGTGCAGCCGCGTTGCAGCGCCTAGCGCGACTCGCCAAATTGGCGCTCGACCGCCTTGAAACTGACAACCCGCTGCATTTGAAAGCGTTAGAGCAAGCGCGAGCGATCCTGCACGAGGCCAGAGCGACCGAGTGA
- Protein Sequence
- MPELEALEARALALHRWRCEVVVERRRADVRDQAQDVLAHAARPGAAKPVESEEKTRRTAEREGRRRARRLRREAAAAPSGAPPRHRDGDSSDDELPPASQHHYRHERECIREASSSLFADALPAWRSVRGVSARLARWRRRAPALYTDAYVAHCLPKLIAPYIRQQLILWNPLADEDNEDYERMDWYKCLMMYGVRSEQIEGDSEDSDSEAEQNGDVSVTESSVREDLDLYLVPTIVNRVVIPKLTELVEYAWDPVCVRSCVRLRALLVRACAQPDAGAALRRLAGRTTARLAAALNADVFLPALPPQVMEGVGGAFWRRCLGAGVRLLRAALALTAPPPALRADPIVLALIDTLCTAAGAAPSTAAAAAAAALADTLPRGGALRAAALQRLARLAKLALDRLETDNPLHLKALEQARAILHEARATE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -