Sbem011674.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000425.1:897446-898228[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-08 3.5e-06 27.0 0.1 2 38 15 51 14 57 0.92
Sequence Information
- Coding Sequence
- ATGGCGCGGTACAAATGCAGAGTTATTCGAGGCAATTGGGCCGAAGACAACATGCAAAAGGCGTTGGCGGCAGTGAAGCGCGGTACGATGAAAATTTATACAGCTTCAAAGCATTATAGGATACCGAGGCGAACACTCAAGAGATATCTCACTAAGAATAAGAAAAAAAAATCATCCTTACGAAGAAAACCGTTGCTCAGTAGAGAGCAAGAAAACGACCTTAAATCTAGGATCATCCGCTTGTGCAGTATTGGATATCCTTTAACATCTCGTGTACTACGGGCATGTGTTGATGTTCTGTTGTTCTGCGACTTGAACAACATTTCCGTATCGAGTAATGGTGTCATGATTGGTCGTGATTGGCTGAGGGGATTCCTTAAACGTCATAAGTACATAAGTCGAAGGAACACTGGAGAGTCAGTTTCATCTTCTAAGGTTATGATGCCTTCAGTCCAACCATCATTATCATCTGAGGACAGGGAAATCGAGACTTCTAAGGATACAATTTTAAATGCTTCTGTCTCAAGTCCATCTGTTTGTGATTCTGTTGAAGTTCTAGAATTAACTACTGAGGCTTCAGCTCTGGCAGTTGCTAAGGAAACAACTTCAGATTGTAATGACAAGACTGTGGAGATTCCAGTTACAGCTCCGTCTACTTCTTCGGACTCCAATGATACATTCAGAAAAATATTAAAAACTCCACAAAAAATGTCAAGTCCAACAGTCGTTCCTAGAAAAAAGGCTATTAACAGTCTAGCTCAAGAATTAATCAGACATTTTTAA
- Protein Sequence
- MARYKCRVIRGNWAEDNMQKALAAVKRGTMKIYTASKHYRIPRRTLKRYLTKNKKKKSSLRRKPLLSREQENDLKSRIIRLCSIGYPLTSRVLRACVDVLLFCDLNNISVSSNGVMIGRDWLRGFLKRHKYISRRNTGESVSSSKVMMPSVQPSLSSEDREIETSKDTILNASVSSPSVCDSVEVLELTTEASALAVAKETTSDCNDKTVEIPVTAPSTSSDSNDTFRKILKTPQKMSSPTVVPRKKAINSLAQELIRHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341170;
- 90% Identity
- iTF_01341185;
- 80% Identity
- -