Sbem018978.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000929.1:149223-149906[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-09 6.9e-07 29.3 0.1 2 40 15 53 14 58 0.92
Sequence Information
- Coding Sequence
- ATGGCGCGGTACAAATGCAGAGTTATTCGAGGCAATTGGGCCGAAGACGATATGCAAAAGGCGTTGGCGGCAGTGAAGCGCGGTACGATGAAAATTTATACAGCTTCAAAGCATTATAAGATACCGAGGCGAACACTCAAGAGATATCTCACTGAGAATAAGAATAAAAAGTCATCCTTAGGAAGAAAACCATTCCTCAGCAAAGAGCAAGAAAACGACCTTAAATCTAGGATCATCCACTTGTGCAGTATTGGATATCCTTTAACATCTCGTGTACTACGGGCATGTGTTAAGACCTTCTGCGACTTGAACATTTCCGTATCGAGTAGTGGTGTCATGATTGGTCGTGATTGGCTGAGGGGATTAATTAAACGTCATAAGTACATAAGTCGAAGGAAGACTGGAGAGTCAGTTTCATCTTCTAAGGATATGATGCCTTCAGTCCAACCATCATTATCATCTGACTACAGGGAAATTGAGACTTCTATGGATACAATTTTAAATGCTCCTGTCTCAAGTCCATCTGTTTGTGATTCTGTTGAAGTTCTAGAATTAACTACTGAGGCTTCAGCTCTGGCAGTTGCTAAGGAAACAACTTCAAATTATAATGACAAGACTGTGGAGGCACCAGTTCCAGCTCCGTCTACTTCTTCGGACTCCAATATTACATTAAAAAAATATTAA
- Protein Sequence
- MARYKCRVIRGNWAEDDMQKALAAVKRGTMKIYTASKHYKIPRRTLKRYLTENKNKKSSLGRKPFLSKEQENDLKSRIIHLCSIGYPLTSRVLRACVKTFCDLNISVSSSGVMIGRDWLRGLIKRHKYISRRKTGESVSSSKDMMPSVQPSLSSDYREIETSMDTILNAPVSSPSVCDSVEVLELTTEASALAVAKETTSNYNDKTVEAPVPAPSTSSDSNITLKKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01341185; iTF_01341186; iTF_01341187; iTF_01341183; iTF_01341184;
- 90% Identity
- -
- 80% Identity
- -