Sbem007754.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000268.1:62760-63740[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-09 1.3e-06 28.4 0.0 5 39 1 35 1 39 0.88 2 2 7.5 9.7e+02 -0.0 0.0 9 18 40 49 37 51 0.86
Sequence Information
- Coding Sequence
- atgaaaaaagctgttgaagctgtacgaacgaaagaaatgggttataaaaaggcagtaaagttatttaacgtcccaagagctaccttgaaagattacgtgaaaaattctgaaaaatctatagaaaatgtagtttctgggaaaatgggaagaagaccagttttgccggtagaattagaagaggagctggtaaactattgcttgcaaatggagaagaattactatggtgttactgcttctgatttaaaacgaatggcttttcaattggctatgaggaataatattccacatccattttcacagaccataaagaaggcgggcaaaaaattgatgaagttatttatggctcgtcatcctgatttgtcattccgtaaaccagagtccttatcacgagctcgtgtacaaggttttaatgcagaaaacgttaagactttttttgacatattgaaacctgaactgcaaaagattggcttcaaccctaataaaatatttaatgttgatgaaactggtatcagcactgttcagcataaagtcagaaaaatcctgactgtgaaaggcaaaagagaagttcacaaattgtcatctgctgaaaggggagcattagtgactattgttacttgtatgtcagctactggtcagtttattcctccattgatggtgtttccaagaaaaaacatgaaagctgaactacttgatggagcacctccaggcaccattagtggatgccacccgtctggttggatccagcctgagctgttcacaaaatggctaagacatttcgtgtccatagtaaaaccatctaaagaagaccatgttttgctggtattagatggtcattacagccatacaagaaatttagacgtgattgacattgcacgtgaaaatggtgtatctgtaatctgcctcccccctcattcaactgatcatatgcagcctttggatgtctcatttatgtttcctttaaaaacatactatgcccaataa
- Protein Sequence
- MKKAVEAVRTKEMGYKKAVKLFNVPRATLKDYVKNSEKSIENVVSGKMGRRPVLPVELEEELVNYCLQMEKNYYGVTASDLKRMAFQLAMRNNIPHPFSQTIKKAGKKLMKLFMARHPDLSFRKPESLSRARVQGFNAENVKTFFDILKPELQKIGFNPNKIFNVDETGISTVQHKVRKILTVKGKREVHKLSSAERGALVTIVTCMSATGQFIPPLMVFPRKNMKAELLDGAPPGTISGCHPSGWIQPELFTKWLRHFVSIVKPSKEDHVLLVLDGHYSHTRNLDVIDIARENGVSVICLPPHSTDHMQPLDVSFMFPLKTYYAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00924536;
- 90% Identity
- iTF_01341092;
- 80% Identity
- -