Sbem003243.1
Basic Information
- Insect
- Sesia bembeciformis
- Gene Symbol
- -
- Assembly
- GCA_943735985.1
- Location
- CALSEZ010000103.1:774167-776002[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-10 6.9e-08 32.5 0.1 3 37 17 51 15 55 0.94
Sequence Information
- Coding Sequence
- ATGGTTCGCACATATAAAAAAAAAACGAATCAGCACTCTTGGTCTATGGAGGCTATGAAAAAAGCAGTACATAGTGTGGTGTCAGGAGAAATGGGTTACAAAAAAGCTGCACAGTCACATGTTGTTCCGCAAACTACACTCGAACGGTATGTGGCAAAATATAGGGCTAATCCAGATAGTACTATATTTCTAAAGAAGTTAGGCCATTACACGACTATATTTTCTCCTGATCAAGAAGAAGAACTGATTAGTTATATTAagataatggaagagcgatttttcggtcttacatcacaggaacttagaaaacttgccttttcgttagccgaaaaaaacaaaattgaacacaggtttaatacacagaatgagctggcgggaatagactggcttaaaggttttttaaaacgacatcgcgatattagctacagaaagcctgaacctacatccgcagccagagctatggggttcaatcgagttgctgttggaaatttttttgatctactggagaagatttacagcaaacacaaactaaatccacagcgcatttttaatgtcgatgaaacaggtgtttcggccgtgcccaaaagccattcaaaaattctagcgtcgtgtggcaaacggcaagtaggaacgatgacttctgcagaacgaggcaaattaatgacaacgattgtttgcttcagtgctgttggtaattacatgcctcccatgtttattttcccgagaaagcggatgaagccagaattacttgatggggctccagctggatcttggggagaatgccatgaatcaggatggatacaaagccacctttttgtcctctggctaaagcggtttatagaatggtcacatgctacaaaagacgatccagtacttttgctcttagatggacatgcgacacatgtgaaatctctggaggtaatcgacatggcccgcgaaaatggagtaattttattatgtttccctccacattgcacacatcgtctgcagccattagacgtaagttttatgaagccacttagcacttactatggaaatgaagtgaaaaaatggctaagaagcaacccaggtcgtgtggtgactcaattccagacgccaacactatttggactggcatttgtagctgcagccacgatgacaaccgcgataaatgcatatagagcaactggaatctggcctatggatcgaaatgtttttactgacgcagattttgCGCCAGCTGAAACAACAAATAATCCACAATATCCGGAAGCATCTTATGATCCACAAAATGCCTCTCACGTTCCACTTACTGTTAACGAGACACCACCGCCGACAGGCTCAACTACAAATCTCTCGACTCGAGAACAAAGATCTCCGGAACCCAGGCAAGGCTCTCCACAGCCTGGATGTTCTTGGATGAATAATTCACAAAATAGTTCTTTTTTGACGTCCCCTGATCAAATTATGCCTTTGCCGAAGGAAAACCGTACGACACAGAGGGTTGTAAGACGAAGAGGGAAAACAGCAATCCTTACAGAATCACCCTATAAAAATGAGCTTGTTGCACTGAAAGAGAGTAAAGAAATGAAAAGAAAGGTCACCAAAACTATCGATCTAAGGCCTAATAAACAAAATAAAAAAAGTAACAAAATAGACAAAAAACAAAAAAAGGTAAAGGAAACCGTAGATGATGAAGATGCTGAATGCATTTATTGCGGTTATTTATGGTCAAAGTCTACGGAGGGTTGGATACGATGCATAAAGTGCAATCGTTGGGCACACTGCTCTTGCGCAGGAGAAGATGATGAGGAAGACGAAACAACACATGTATGTGCCATATGCGTTGTTGATTAA
- Protein Sequence
- MVRTYKKKTNQHSWSMEAMKKAVHSVVSGEMGYKKAAQSHVVPQTTLERYVAKYRANPDSTIFLKKLGHYTTIFSPDQEEELISYIKIMEERFFGLTSQELRKLAFSLAEKNKIEHRFNTQNELAGIDWLKGFLKRHRDISYRKPEPTSAARAMGFNRVAVGNFFDLLEKIYSKHKLNPQRIFNVDETGVSAVPKSHSKILASCGKRQVGTMTSAERGKLMTTIVCFSAVGNYMPPMFIFPRKRMKPELLDGAPAGSWGECHESGWIQSHLFVLWLKRFIEWSHATKDDPVLLLLDGHATHVKSLEVIDMARENGVILLCFPPHCTHRLQPLDVSFMKPLSTYYGNEVKKWLRSNPGRVVTQFQTPTLFGLAFVAAATMTTAINAYRATGIWPMDRNVFTDADFAPAETTNNPQYPEASYDPQNASHVPLTVNETPPPTGSTTNLSTREQRSPEPRQGSPQPGCSWMNNSQNSSFLTSPDQIMPLPKENRTTQRVVRRRGKTAILTESPYKNELVALKESKEMKRKVTKTIDLRPNKQNKKSNKIDKKQKKVKETVDDEDAECIYCGYLWSKSTEGWIRCIKCNRWAHCSCAGEDDEEDETTHVCAICVVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00794291; iTF_00794292; iTF_00794293;
- 90% Identity
- -
- 80% Identity
- -