Basic Information

Insect: Sesamia nonagrioides
Gene Symbol: Znf296
Assembly: GCA_017933935.1
Location: JADWQK010000412.1:118586-139017[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.12 18 7.7 0.5 1 21 157 177 157 178 0.94

2 13 7.1e-05 0.011 17.8 0.7 2 20 191 209 190 213 0.95

3 13 0.087 13 8.1 0.9 2 23 253 274 252 274 0.94

4 13 6.1 9.2e+02 2.3 0.2 2 23 351 373 350 373 0.88

5 13 0.011 1.6 10.9 0.3 1 20 378 397 378 399 0.92

6 13 6.8e-05 0.01 17.8 1.0 1 23 407 430 407 430 0.98

7 13 7.3e-05 0.011 17.8 2.2 1 23 451 473 451 473 0.98

8 13 6.6e-06 0.001 21.0 3.8 1 23 480 502 480 502 0.99

9 13 1.4e-07 2.1e-05 26.3 2.3 3 23 516 536 514 536 0.96

10 13 3.1e-05 0.0048 18.9 3.2 1 23 542 564 542 564 0.99

11 13 2.7e-06 0.00042 22.2 2.6 2 23 571 592 570 592 0.96

12 13 4.7e-08 7.1e-06 27.8 1.5 1 23 598 620 598 620 0.99

13 13 0.0039 0.59 12.3 0.1 1 23 626 648 626 648 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.12	18	7.7	0.5	1	21	157	177	157	178	0.94
2	13	7.1e-05	0.011	17.8	0.7	2	20	191	209	190	213	0.95
3	13	0.087	13	8.1	0.9	2	23	253	274	252	274	0.94
4	13	6.1	9.2e+02	2.3	0.2	2	23	351	373	350	373	0.88
5	13	0.011	1.6	10.9	0.3	1	20	378	397	378	399	0.92
6	13	6.8e-05	0.01	17.8	1.0	1	23	407	430	407	430	0.98
7	13	7.3e-05	0.011	17.8	2.2	1	23	451	473	451	473	0.98
8	13	6.6e-06	0.001	21.0	3.8	1	23	480	502	480	502	0.99
9	13	1.4e-07	2.1e-05	26.3	2.3	3	23	516	536	514	536	0.96
10	13	3.1e-05	0.0048	18.9	3.2	1	23	542	564	542	564	0.99
11	13	2.7e-06	0.00042	22.2	2.6	2	23	571	592	570	592	0.96
12	13	4.7e-08	7.1e-06	27.8	1.5	1	23	598	620	598	620	0.99
13	13	0.0039	0.59	12.3	0.1	1	23	626	648	626	648	0.97

Sequence Information

Coding Sequence: ATGGCCTCTAGTCAGGAATCTGTAATAAAAATTGAAGAATTGTGTAGAACGTGTTTGTCTAAGGATAATGAATTACACTCGCTATTTGATATTATTATTCGAGGTTCAACAATCACTTTAGATTACGTAGTAACATCAAGTACTGGGATACagATTAGCAAAAATGATGGCTTGCCTTCAACAATTTGCTGCGAGTGTAAAGAAAAAGCGTCAAAAGcatatgaatttaagaaaaaatCGGAAGAGGCTTATATGTTCCTTAAAgggatattaaaaaaagaaagctcAACATCTACTAAAGTTTTAGCTGCAACTAATACATTAGATGTGAAGACCGAAGATTTTTCATCacatgataatgatgactatgGAGATAGTGATTTCAATGGTTCCCTATGTAGTGGGGCAGATTTACATGAACAAGATGCTGTTAAAATTGAGCATGACGGCGTAGAACGCAAATCATGCTTTGTGTGCAAAAGCTGCTTAGTCGTTTTCGATACACATTATAAGTTACAGGAACACGAGAAGATATGCATAAAAGTTGAATGTGATGAGACGAACCGTACTTATTGCCCACTTTGCGGTACATGTTATAATGATGCAGAGAATTTAACGAAACATATGTGGGAAAATCATGCAGACCTTATGGGCCCAAAAAAGAGAGGCAGACCTAAGAAGATGTTAACTAGTACCATTCTCAACAAGTTGTCAGAAAACGGATTTTGCATAACATCAATGCCAGCTAAAAAGATTGAGTGCGCATTTTGCAAGCAACATTTCGAAACCAAAGAAGAATTAGGATCACATTCTGTAACTCATAAAGATATGAAAGTTCTGCGCTGCGGCCTTTGCAAGAAAATATACCTTGATAGGAAAAAGTTTGATCATCATGACTGTATTGAAGAGAAAGCTGATGTTAACAATACAGTAAATGATTTGGCTAAAACAGAAACCAATGAAagaaaaacacataattttctgtCAGAAATTACACTACGAGAATTTCTAGAGCCGAACATGGATATGGAGAATATCAACATGCTTATAGTATGTAGTGCTTGTAGCTGCGTATTGCAATCAGAATCGGAACTCATTAGCCATCGCGATGCTGAACATCCGGAGTTGTCTCACCGGTGCAATCTCTGCACTAAGGTGTTTGCTTCTCTGCGTTCAGCGGCACGCCACAGAAGCATTTGTAAgaaaattgaaagaaaatataaatgtaacacGTGTGGACTGAAATTCGAGTATGAAATatctttaaataaacatattttaagataTCACAAGGGACAAAGTGTGTCGGTTAAATTTATTGATTCCAAAACCAAACGAGAAGAGAGACAGTTTCAGTGTGACACTTGCAGTAGAAGTTTCTACAAGAGAGATTTGCTGGTTAAACATACTAAAATACATATGCCAATCGAAAACTTCTTCCAATGTGATGTTTGTGAAAAGAAGTTCCACAGGAGTGACAATCTTCGCTCTCACAAACGGGTTCATCAGCCGCAGCGCGATAAGAGTGCATCTAGTAATTGCTTATGCCTTTACTGTGGCCGCAGTTTCTCTAACTCATCGAACTTAATCGTACACATGCGTCGTCACACTGGAGAGAAGCCCTACAAATGTGATTTTTGTGGCAAAGGTTTTCCAAGATCTTCCGATCTTCAGTGCCACAGGAGATCTCATACTGGAGAGAAACCTTGTATATGCCGTGTATGCGGTAAAGGTTTTTCGCGCAGCAATAAGTTGTCTCGCCACATGCGCGTGCACACTGGCCAGCGGCCGTACAAGTGCACCTACTGCGACAAGGCGTTCTCGCAGAGCAACGATCTCAACCTGCACATACGCCGACACACTGGCGACCGGCCCTACATCTGCGAAGTGTGCGGCGATAGATTTATACAGGGTACCGCGTTACAGAATCATAGAAGAGCTCATGGCCACTTTCCTGCTCCTCCCGCAGATGCTCCTTCCGAGGTGCAAGCACTGACTTTTACAGTTCAGAATATAGGTCATAATAATAGTCACTAA
Protein Sequence: MASSQESVIKIEELCRTCLSKDNELHSLFDIIIRGSTITLDYVVTSSTGIQISKNDGLPSTICCECKEKASKAYEFKKKSEEAYMFLKGILKKESSTSTKVLAATNTLDVKTEDFSSHDNDDYGDSDFNGSLCSGADLHEQDAVKIEHDGVERKSCFVCKSCLVVFDTHYKLQEHEKICIKVECDETNRTYCPLCGTCYNDAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECAFCKQHFETKEELGSHSVTHKDMKVLRCGLCKKIYLDRKKFDHHDCIEEKADVNNTVNDLAKTETNERKTHNFLSEITLREFLEPNMDMENINMLIVCSACSCVLQSESELISHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKKIERKYKCNTCGLKFEYEISLNKHILRYHKGQSVSVKFIDSKTKREERQFQCDTCSRSFYKRDLLVKHTKIHMPIENFFQCDVCEKKFHRSDNLRSHKRVHQPQRDKSASSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCDKAFSQSNDLNLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPAPPADAPSEVQALTFTVQNIGHNNSH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00072259;
90% Identity: iTF_00449489;
80% Identity: -