Snon021498.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sesamia nonagrioides
Gene Symbol
bab2
Assembly
GCA_017933935.1
Location
JADWQK010001079.1:378516-389425[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-24 6.2e-22 79.5 0.0 2 100 22 116 21 125 0.91

Sequence Information

Coding Sequence
ATGGCGAATCAGgaaataagtttaaaatggAACGGGTATCAGAGCAACATATTGTTCAAtgtaaaagaattattcaaagaCGAAGGCTTGTCGGATGTAACTTTGGTTTCTGAGGGCCACAGTTTTAAGGCTCATAAAGTGATATTATCAGCAAATAGTTCAGTTTTCAGGACAATCTTCCAGCAAAACCCCCACAAGGATCCAATTATAGTGCTTCATGACATCAGTACGGCATCTTTGCGGACTCTACTAACGTTTATGTACAATGGGGAGGTGAATGTGACTGAAGAATTCCTGCCAATACTATTGAAGACAGCGGAGACGTTGAGAATTTGTGGTTTGTCTACAGGCAGTGAGGTTTCACGTGAAGAGGATaaaacTACAGGGAGCACAGTGCCAAAAAAACGTAAGAAAAGTGAGCAAGAAGATGTAAGCGGAAAATGCAAGAAATGTGTGTCGACACAAAGTAGGCAAGATGCAACTCAGAATAACCTAGTGCCAAAATTAGAACCAGCAGAGTCACCATTAACAGACTATTCTTGTGACAACACAATTGATACTGACCTTGCAGTACTTGATGATGTTGTGGAGAAGAAGCCTAATAAATCGTCAGCAGCTCAGACAAAAAAgcggaaaaggacagaacaagATAACAACAATAAGTGTAAAAAGTGTGTACCAACTATTGATACCGAAAATGTTCACAAGATTACGTCAGATAGTGGAAAACAACCTAATGTTGTACTCAAAATTGAACCGATAGAATCACCCCTCACTGACTATTCCGGAGACAATACGAATGACACAGACATAGCGTTACTAGAAGATACATCGGACAAGAAACATGTGAGTGCAGAAAATTGTCTCAACAAAAGGATGTATATGTTAAATGACCGTAGTGATAAGATTGAAGTGAGCAGTACACAGCCTTGTTTGAATGAGAAGATTAACAGTGGTAATGCGTCCGATGAAATAATTGAAATAGACAAAGAAGTAGAGACTGTACTACAAAGTGGAACAAGAATCGAGTCGCTGAGTATAAAAACGGAGAATCTTAATTTGGTGTCTACTGATGCACAGAATTGTAAAGATCCATCATTCCCTTGCCCGTTCTGCCCTCGTGTGTACAACAGTTGGGGGTATAGGCGGAGACATGTTAAATCTAGACATGTTACCAACAGACTGTCTTGCAAGTGGTGCGTGTCAGTGCTGCCGTCCACTGGCGCGTGGTACACGCACGCCACGCGCTCGCACGGCGTGCCGCACGAGGAGGCGCGCAACTCGCTCGTCGTCATGGTGGAGGCACACGCCGTCTTGACGCTCAACGAACCCAACGTCACACAGTTACTCGTTTGA
Protein Sequence
MANQEISLKWNGYQSNILFNVKELFKDEGLSDVTLVSEGHSFKAHKVILSANSSVFRTIFQQNPHKDPIIVLHDISTASLRTLLTFMYNGEVNVTEEFLPILLKTAETLRICGLSTGSEVSREEDKTTGSTVPKKRKKSEQEDVSGKCKKCVSTQSRQDATQNNLVPKLEPAESPLTDYSCDNTIDTDLAVLDDVVEKKPNKSSAAQTKKRKRTEQDNNNKCKKCVPTIDTENVHKITSDSGKQPNVVLKIEPIESPLTDYSGDNTNDTDIALLEDTSDKKHVSAENCLNKRMYMLNDRSDKIEVSSTQPCLNEKINSGNASDEIIEIDKEVETVLQSGTRIESLSIKTENLNLVSTDAQNCKDPSFPCPFCPRVYNSWGYRRRHVKSRHVTNRLSCKWCVSVLPSTGAWYTHATRSHGVPHEEARNSLVVMVEAHAVLTLNEPNVTQLLV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00685603; iTF_01339076; iTF_00726599; iTF_00121601; iTF_00301345; iTF_01062019; iTF_00302281; iTF_01028459; iTF_00906316; iTF_00907182; iTF_00425596; iTF_01192861; iTF_00908062; iTF_00018305; iTF_00017479; iTF_01377635; iTF_00450305; iTF_01361794; iTF_01362532; iTF_01363257; iTF_01538916; iTF_00327205; iTF_00822117; iTF_00445351; iTF_00446370; iTF_00973928; iTF_01118472; iTF_01117495; iTF_01119518; iTF_00111808; iTF_00043713; iTF_00809314; iTF_00810253; iTF_00072218; iTF_01084418; iTF_01085539; iTF_00383845; iTF_00667685; iTF_01526213; iTF_00037962; iTF_01527478; iTF_00364185; iTF_00622982; iTF_00123524; iTF_00447399; iTF_01031271; iTF_00449321; iTF_00758411; iTF_00850923; iTF_00951979; iTF_00300390; iTF_00952839; iTF_00851964; iTF_01026475; iTF_01029411; iTF_01285702; iTF_01030385; iTF_00888415; iTF_00124428; iTF_00375470; iTF_01440228; iTF_00171982; iTF_00374358; iTF_01441240; iTF_00038991; iTF_00036972; iTF_00147664; iTF_01342352; iTF_00050088; iTF_01094193; iTF_00745939; iTF_01095093; iTF_01093273; iTF_00000466; iTF_00042803; iTF_00040033; iTF_00041039; iTF_00831379; iTF_00071640; iTF_00924921; iTF_01230777; iTF_00001308; iTF_00273756; iTF_00784540; iTF_00783673; iTF_00785340; iTF_01062972; iTF_00712072; iTF_01064809; iTF_01534093; iTF_00237904; iTF_00928851; iTF_00041940; iTF_01063895; iTF_01535070; iTF_01425246; iTF_01532254; iTF_00122559; iTF_00173216; iTF_00772159; iTF_01247263; iTF_00120671; iTF_00274560; iTF_01027488; iTF_00186415; iTF_00185454; iTF_01221739; iTF_00786127; iTF_01492152; iTF_00677799; iTF_00282570; iTF_00869803; iTF_01152316; iTF_00794816;
90% Identity
iTF_00173216;
80% Identity
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