Snon028495.1
Basic Information
- Insect
- Sesamia nonagrioides
- Gene Symbol
- retn
- Assembly
- GCA_017933935.1
- Location
- JADWQK010001407.1:182622-194190[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-19 1.1e-15 59.4 0.1 16 89 38 109 11 109 0.93
Sequence Information
- Coding Sequence
- ATGGTGACCATTACAACGTCATggcatagaaaagttacacatAATCTTGCACATCAAAGCGAGGTGCACTATCAAAAGATGACCAGAGTATCTTGGCCTTTGTACCCTTTAAGATGTACTCCGATCAATCGGTTACCGATAATGGCCAAGTCGGTCTTAGACCTCTACGAGTTGTACAACCTGGTGATAGCTCGCGGCGGACTGGTAGAGGTTATCAACAAGAAATTGTGGCAGGAGATCATCAAGGGACTGCGTCTTCCCTCTTCCATCACATCTGCTGCCTTCACATTACGCACACAATACATGAAATACTTGTATGATTACGAGTGCGAGAAGAAGAACCTATCAACCAGGAGCGAGTTGGACGCAGCCATTGAAGGCAATAAGCGCGAGGGTCGCCGCGCCTCGGGACAGTACGACGCACAAGCTGCTCTGGCCATGCCCCAACTCAACCGCGTGCCTGCATCTCTGGCGCAGCTGACGCAACATATTCAACCATTGTCACTAACACTGGGAGGTGTCCCACCACGGTTGCCGCagctgccgccgcacgcaccgCATCTCGCTCCGCACGAACTAGAATACAGGGTGCGAGAGTATATGAAACTTTTACACCAGAGGGAGCTAAGAAGAAATGGCTCCGAATCGCCCCCTAGTAATCTCCCTGGTTCAATGATATCTCCTCGAGATGCCTTGAATGCCATGGACATATCCCGTCTCACACTGTGGTCACTCTACAATAATAACAACATCAGCAGCCCACAACCCGAACTGGAGCCACAACGCGAGGCTCTGAATCTGAGCGAGAGCCCTAACTCTGTGGCGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCCAACCGCCCGCCAAGCGACGCTCAACGCGCTCTCCCTCGCGCCCCCGCACGCCGCGCTCAGGCCCCTCGCCGCCCTCGGACCCCTCGACGAGCTCAGACCCCTCTCCGCCGCAGCACCGCCACAACCACATGGACTCCACGTCACCACCACAGATCAACGGCACGCCCAACACCAATGGTGTCAATGGGGCGTCCTTCAAGATTACTACAAGAGGAGACGCAAGCACAGGCGACCAGCAACTGGTAGTATCAATAGAGCTGAATGGAGTAGTATATGAAGGCGTACTTTTTCCCTCGGGAAACGGCCAGAACGGACATACACATATGGTGTCTTAA
- Protein Sequence
- MVTITTSWHRKVTHNLAHQSEVHYQKMTRVSWPLYPLRCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPQLNRVPASLAQLTQHIQPLSLTLGGVPPRLPQLPPHAPHLAPHELEYRVREYMKLLHQRELRRNGSESPPSNLPGSMISPRDALNAMDISRLTLWSLYNNNNISSPQPELEPQREALNLSESPNSVASGGKREACRSPQPPAKRRSTRSPSRPRTPRSGPSPPSDPSTSSDPSPPQHRHNHMDSTSPPQINGTPNTNGVNGASFKITTRGDASTGDQQLVVSIELNGVVYEGVLFPSGNGQNGHTHMVS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- -
- 80% Identity
- -