Basic Information

Insect: Sesamia inferens
Gene Symbol: RREB1
Assembly: GCA_037179545.1
Location: CM073945.1:14420130-14424551[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.084 12 8.1 0.6 1 23 80 103 80 103 0.94

2 11 0.024 3.5 9.9 0.1 1 23 294 316 294 316 0.97

3 11 0.0013 0.19 13.9 0.4 1 23 325 347 325 347 0.99

4 11 0.0008 0.12 14.5 2.0 1 23 353 376 353 376 0.97

5 11 0.0032 0.47 12.6 1.6 1 23 727 750 727 750 0.96

6 11 0.00027 0.039 16.0 1.3 2 23 945 966 944 966 0.97

7 11 0.078 11 8.2 6.2 1 23 972 995 972 995 0.96

8 11 0.24 36 6.7 1.1 1 23 1028 1052 1028 1052 0.91

9 11 0.016 2.3 10.4 0.3 1 23 1075 1098 1075 1098 0.97

10 11 0.025 3.6 9.8 0.3 2 23 1138 1159 1137 1159 0.92

11 11 0.031 4.5 9.5 5.3 1 23 1165 1187 1165 1187 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.084	12	8.1	0.6	1	23	80	103	80	103	0.94
2	11	0.024	3.5	9.9	0.1	1	23	294	316	294	316	0.97
3	11	0.0013	0.19	13.9	0.4	1	23	325	347	325	347	0.99
4	11	0.0008	0.12	14.5	2.0	1	23	353	376	353	376	0.97
5	11	0.0032	0.47	12.6	1.6	1	23	727	750	727	750	0.96
6	11	0.00027	0.039	16.0	1.3	2	23	945	966	944	966	0.97
7	11	0.078	11	8.2	6.2	1	23	972	995	972	995	0.96
8	11	0.24	36	6.7	1.1	1	23	1028	1052	1028	1052	0.91
9	11	0.016	2.3	10.4	0.3	1	23	1075	1098	1075	1098	0.97
10	11	0.025	3.6	9.8	0.3	2	23	1138	1159	1137	1159	0.92
11	11	0.031	4.5	9.5	5.3	1	23	1165	1187	1165	1187	0.97

Sequence Information

Coding Sequence: ATGTACTCTTTTGTTACAGAAATCAAAACAGAGGAGGTCATCCGTGAAGCTAAAATCGAGGCCGACGAAATGGACGGCACTCAAATTGAAAAGCAAGAGCTGCGCGTCACTAGGACGACTAGCATCGATAGTGATAACAGATCTGATAGGAGTGAGGAGGAGGATTTGAGGAGAGCGCGCAAACGTGCAGCCTCCTCATCACCATCACCTATCCCGATGGACAAAAGAATAGCAAAGTTCGAGTGCCCCAAATGCCGGCAGCGATTTGATTCGGTCAACGCGTTTGACATACACAGATTCACTGTGCACAGTGACGACACCAAGACTGGCTTCGACGATCTTACCTTTGTCGATTTTTCAAGCAAAAAGTTCCCTGAAATTGCCAGAGGTGTCTGTGAGAAAAAGCCTCATGTGTCAGTGACAGATCAGCGATATAGATGCGATGTATGCTACAGAGACTTCCCGTGTGGACAAGCATTGGATATTCATAGGAAATCGTGCCTGTCCACCACACGCATCACACAAAGCCCAGAAAAAAATCACAGGGAAGATTTCTTCGCCAAGTTAGATCTCAGAAACAGGTCTTTTGGCATTGCTGGTACTTTGACGCCACCTATGGATAGATTCACAACCAAATTTGAAGAAAATCATCTTAGCAATGGCATAAGACACATCGACGCGGCGCGAGATTTAGCGGACATCCAGTCCATATTAAATGTCACGTCAGCCGGTGGACTTTTAGAGAGACTCACTGGCACAAGAGTGTCATTAGAAACTTCAGTTTTAACCCCTCCTGATACCATTGTCAAGGATAGAGATCAAGAGGAAACCCAGGACAATTTCGCAGCAGAGTTTAGACGGATGAAACTGCGTGGAGAATTCCCCTGTAGGTTGTGCCCTGCCAAGTTTCCGAATTTAAGAGCTTTGAAGGGACACAATAGAGTGCATTTGAGTGGAACGGGCCCGGGTCCTTATCAGTGTAACATGTGCCCTCATGCCTCTTTAGATAAGGCTGCGTTAGTACGTCACATGCGTACACATAACGGGGATAGGCCGTATGAATGCGCCGTGTGCAATTACGCTTTTACTACAAAAGCTAATTGCGAGAGGCATTTGAGAAATAGACATGCCAAAGTTACAAGAGAAGACGTAAAAAGGTCAATAATATACCATCCGTCAGAAGATCCTAATAATGACGAAGTCAATTCAAAACTTGCAAGGGATGAAGTGAAGAGATCACTCGCATTCCACACTCCTGACATTGATAGGAGAAACGAAAGTTCAGGACCCGATACGCCACTAACCCACTTTACTCCAAGTTTTATCACTGACAGACATCCAGTCAGCAACTTAACCACCAAAAAATTACCATTACCTGAATCGCCTCTAGCTCTGCCTATACCAAGAGACGTAGAGCAATCGCAACCTAGAATCAAAGTAAAGGGTATTGGGCAACTTACCCGAATGCCTGAATTCAGGCCACCAGAAATCAGGTACCAACAAAATGACTCTCATGATTCCTATGATGATGAAGCTCCAGTTGACTTGAGCACGAGTGATAATAACAGTTGTGATGTCCTAGACCTCAGTAAGAAGAAACCGGACACAGATTCTGAGGAGCCAAGGGCCCTACCGCGTCCTTCTTTCGAGCCTGACCCAGCGAGCGTTGCTGCTTCAGCATACGAAAAGACAAGATTCCTTTTAGCTTCCCAAAGAATCTTCGAAAACTCGCTGCCTAAATTAGATCCAGCTTACTATGCCACCCAGCTTTCACAGTTGTATGCAGGCACAGTTCCTGCAATTCCAGGCTTGGGCTTATCTCCAACATTTCCCATAGCCCCCTACCTACTTCAACCATCGTTTTTTCCTCACCCAACCGATTCCCAGGAAATTGCCGAAATAAAGCAGCATATACAAAAAGAGATAATACGAGGCTTGAGCATGTCTGGTGGCAGACTTGTTCCTAATGACCAGGACAGTCAGCCTAAGATTGAGCCTGAGGATGAGGAACTAAAACCACCTCCATCGATTTCTCCAATACCTTCACCACATTCCGAATCTCCACGTCCGCCTATAAATAGTACTCTCGTCCCGCAAACAGATTCTGTGAAGATGGTAATAAAGAATGGTGTTTTGATGCCCAAGCAAAAACAAAGGAGGTACAGAACTGAAAGACCTTTTTCCTGCTCTCAATGCTCAGCGCGTTTTACCCTCCGGTCCAATATGGAACGCCATGTCAAGCAACAACATCCTCAGCATTGGAGTGTGAGACGACCAACTCCAAGGGCACCACCACCGTACCCAACATCTGATTCATTGACTGATCGAATGAAATTCGCCTTATTAGCTCGCCATCTTGAAAGACCTTTGAAACAATCTGACGGCTCGCCTGTGCGACGTGACTCAGACGAAGTCGCAGATAATGAGGAGGATGAAGATGATACCTTGGTAATAGATGAGGAACCTGACCAGGAAAAAAGGTCAGAAGATCATACCGCGGCGCGCCGTGCAGCTGCTGAAATCCTCATGGCTACGTGCCAACAGGAAATGACCAAGGATTTCGACCTTAAAATTGCTGGGAACCTAATCAACAAGCCTGTTCctttaaacaacaacaaaactgATTTCGAAACGAATTCTGTGTCACTGAGTCAAGAGCCAATGCCTATCCCGGTGGTTCCCACCCGAAGCGATGAGGAAGAAGATGAAGAGGGCTTAGTCGCCTCCACAAGTGAGGGAAATAACTCTGGCAGTGACGAGAATAAATCAGAAACGGACACTGCATTACCACCAAAGAAGAAGTCGGCTTATAGCCTAGCGCCAAACCGCGTTTCATGTCCCTATTGCCATCGCAAGTTCCCCTGGTCATCATCCCTCCGTCGTCATGTCCTCACGCATACCGGACAGAAACCATTCAAGTGTCCACACTGCACCCTTCTTTTTACGACTAAATCTAATTGCGATAGGCATATGGTCAGGAAACACGGAGGTTCCGCTAGAGCTATCCTGGCTGACCCAATCCCTGATACAGTGTCTCCACCGCAGCCGATAAATGACACTAGAGCAGTGCCAGAAAGGCCTTACAAATGCGTATCTTGTCCAACAAGTACGTTCTCATCAatagaaactttaaaaaaacacatgtcctCAAGACACGGAGCTGATTCTCAACCGGGCTCGCCAAACCCTGAGATAGGTGAAGATTCTAATGAAAGTCTTGTCTTCAAATGCCATCTGTGCGAGGCGTCATTCGGAGACAGGAGCGGAGCCCTATCGCACTTGGCGACAGATCATAGGACTGAGTATGAGCAGCTGGTCAGTAAGGGAGCCTTAGAAGCTGCCAGTGACCGCAGTGAAAGTGCCGACGATGATGATAGAGGAAAATTTCCTGACCATGCTAACAGAAAGGTGGTCTGCGCCTTCTGTATCCGAAGATTCTGGTCTGCCGAAGACCTTCGACGTCACATGAGGACCCATTCCGGAGAGAGGCCGTTCGCTTGCGACCTATGCCGACGTCGCTTCACTCTAAAGCACAGCATGCTCCGACATCGCAAAAAGCATCGGGACGATCACATCATCACGGATGATGAAGAAGCTTCTCCGCCCGACACACTTCCGGAAGATTCTGTAACTAATGGATATCGCTACCATGACGACGACGGCAAGGGCAACGAAATCCCAAGCAACGTCAATAACAACAACTCTCCTCCCTCCGCCCCGTACGAAAAGAAGCTCAAACTGGACATGATATCAAGAAAGTACTCTTCCGAGGCCGAAAACGAGCCGGAGAAAAGCGACGACATAATTGGGCAACTTCTCGGACTGCCCGACAAAACCATTAACAAGCTACTCTCCTCCGCAGACGAGGCCGCGAAAATCCTTGGTGTGAATAAATGA
Protein Sequence: MYSFVTEIKTEEVIREAKIEADEMDGTQIEKQELRVTRTTSIDSDNRSDRSEEEDLRRARKRAASSSPSPIPMDKRIAKFECPKCRQRFDSVNAFDIHRFTVHSDDTKTGFDDLTFVDFSSKKFPEIARGVCEKKPHVSVTDQRYRCDVCYRDFPCGQALDIHRKSCLSTTRITQSPEKNHREDFFAKLDLRNRSFGIAGTLTPPMDRFTTKFEENHLSNGIRHIDAARDLADIQSILNVTSAGGLLERLTGTRVSLETSVLTPPDTIVKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPDIDRRNESSGPDTPLTHFTPSFITDRHPVSNLTTKKLPLPESPLALPIPRDVEQSQPRIKVKGIGQLTRMPEFRPPEIRYQQNDSHDSYDDEAPVDLSTSDNNSCDVLDLSKKKPDTDSEEPRALPRPSFEPDPASVAASAYEKTRFLLASQRIFENSLPKLDPAYYATQLSQLYAGTVPAIPGLGLSPTFPIAPYLLQPSFFPHPTDSQEIAEIKQHIQKEIIRGLSMSGGRLVPNDQDSQPKIEPEDEELKPPPSISPIPSPHSESPRPPINSTLVPQTDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPTPRAPPPYPTSDSLTDRMKFALLARHLERPLKQSDGSPVRRDSDEVADNEEDEDDTLVIDEEPDQEKRSEDHTAARRAAAEILMATCQQEMTKDFDLKIAGNLINKPVPLNNNKTDFETNSVSLSQEPMPIPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSETDTALPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCTLLFTTKSNCDRHMVRKHGGSARAILADPIPDTVSPPQPINDTRAVPERPYKCVSCPTSTFSSIETLKKHMSSRHGADSQPGSPNPEIGEDSNESLVFKCHLCEASFGDRSGALSHLATDHRTEYEQLVSKGALEAASDRSESADDDDRGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHRDDHIITDDEEASPPDTLPEDSVTNGYRYHDDDGKGNEIPSNVNNNNSPPSAPYEKKLKLDMISRKYSSEAENEPEKSDDIIGQLLGLPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_01533483;
80% Identity: -