Sinf033854.1
Basic Information
- Insect
- Sesamia inferens
- Gene Symbol
- Trpm
- Assembly
- GCA_037179545.1
- Location
- CM073940.1:7589954-7618510[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-07 7.9e-05 23.9 0.3 4 37 184 217 181 225 0.89
Sequence Information
- Coding Sequence
- ATGATTGGTGTCGATAGCAGATTCGTTGAACATTTATTGATGGACCGTATAATTGAATGGAAACACCATGTCATTGTTACAGACACACACTCCTCAACCCCTGTGGTCTGCTTGGTGATAGAAGGCGGCACCAACACCGTGCGGGCCGTGCTGGAATACGTCACCGACACACCACCGGTGCCCGTCGTTGTTTGTGATGGCAGCGGCCGAGCGGCGGATCTCATCGCTTTTGTTcataaATATGCATCGGAGACGGGCGAACAGACGGTTCTGGAGTCCATGCGGGACTACCTGATCAGCACCATTCAGAAGACCTTCGAAGTTGGATTGCAGCAAGCAGAGCTTTTGTACGGCGAGTTGTTGCAGTGCACCAGGAAGAAGAACCTGGTAGCCCGTGCCGCGAGCGTGTTGAGACTTGCAGTCGAAACCAACCAGGACGCGGAACGCACgcttgtttttataaaattgtgGCCGAGTAAAaaTAACATCATGGAAACCGAATCACCAACTTCTACCATAAGGAAAAAAAGAGCTTTATGGACGTCGCAACAGATGAAAAGCGCTGTTGAAATGGTTGAAAGGGGTATATTATCCACATATGCTGCTGCAGCCAGATACAACATCCCAAGAAGGACCCTACGTAACCATCTAGCGAGTGGTTCGACTACACGAAAGCTAGGTCGGTCGGCTATATTGACTGCAGAACAAGAAGCTGGACTTGTCAGAAGAATCGTACGTTTGGCTGATGTTGGAGTGCCAATGACTTCGAAGATGTTACGCATACAGGCTCTTTCATTttgtaaagttaaaaaaattccAAACACATTCAATGATGCCAAAAATGTTGCGGGGAAGAAATGGTTGAGACTATTCCTCAAACGACACCCGGAATTAGCACGTCGTAAAGCACAGATGATGAATCCAGCTCGTgcacaaaaattaaataaaattattgttggTGATCACTTTTCCAAATATAAAAGCGTACTGGATAGACTTGGAATTGAACATAAACCTGAAAGCATTTACAACATTGATGAAAAAAATTGTCGCATATCTTTGCACCATCAGCAGCAAGTTCTGACAGCCAAAGGGAGAAAGAGAGTTCATCAAATAGCAAATGAGCATGCTGAAAGTGTGACTGTGGTAGGCTGTGGAAATGCTATAGGATCAGCTATTCCGCCAATGATATTATTCAAGGGCAAGAGACTAAAGCCAGAATTCCAAGATAATTTGCCTCCAGGCTCCCTGGTGAAGATGACGCCAAAAGGAAGCATGACGACTGGAACTTTCATAGAATTTATTAATCACTTGAATAAATACAGAACATCAGGGCCATGTCTCCTCATATTTGAtggtgcaaaatgccacctggacTATACTATTGTCGAGGAAGCTGAAAAGTGTGGTATTACTTTATATTGTCTTCCATCAAACACTACACATGAGCTACAGCCTATGGATAAATCTGTATACCGTTCTTTTGAGCACCATTGGGACCAAGAGTTAATTAAATACGTCAGTCAGCATCCCGAAAGAACCCTTAACAAGACAAGCTTCAATGTCATACTTTCACAAGTATGGCCTAAATGTATGACTATTACCAATATCTCGAATGGGTTTCGCGCTACAGGGTTATATCCTTATAACCCAGATGCTATTCCTGAAGAGGCGTTTGCACCTTCTGCGTTGTCAGAACTTCCAAATCCTACAAACAGTGAGAATATTTCTGTCTTATCTGATAGAACGGGCGAACAAGATATTTCGACTGCAAACGTGGAAGATTCAGATGGGTCAGGCACAGATACTGAGAATTTGCCACTGTCCTTGCTGTTAAACAATCCTAATGCTAGAACTCCACATAAGATAGACAACCAATCAACCACTTGTGAGATTCATGGATTTTTACCAACTCCTAAGTTTAAAGTTGCAGCGGCTGCTCCACGCAAGAAGTCTTTGAATTACAGGGCTCAAGAGGTGACAAAAGATTTGTTTGGTAACAATGCTATAAATTCCACATCACAAATTACTGTACCATCGTCAAGAGCAGAAGATGTTCCTGGCACGTCTTCCGTGATAACAATTAACACAAAGACACCAAAATCACATTCAGTTACTGGCTATATACCTGCACAAGCTGCAGTTGCTGCAACGCGAAAACAAACCTCAGTAAAGACTGCTTCTTTGACAGCAGATAAGCTTACGGGATCTAAACTGAAACGTAACGACAACAAACCTTCTTGGTACTGCCCAGCTTGTAAAGAAGATCGAGTTGATGATATGCGACAATGTCTTAGTTGTGGTGTTTGGTATCATGAGGTGTGTGTTGGACTCACACCCgctgataaaatattttactgttCAGGAGATTGTTTAAAGAAATAG
- Protein Sequence
- MIGVDSRFVEHLLMDRIIEWKHHVIVTDTHSSTPVVCLVIEGGTNTVRAVLEYVTDTPPVPVVVCDGSGRAADLIAFVHKYASETGEQTVLESMRDYLISTIQKTFEVGLQQAELLYGELLQCTRKKNLVARAASVLRLAVETNQDAERTLVFIKLWPSKNNIMETESPTSTIRKKRALWTSQQMKSAVEMVERGILSTYAAAARYNIPRRTLRNHLASGSTTRKLGRSAILTAEQEAGLVRRIVRLADVGVPMTSKMLRIQALSFCKVKKIPNTFNDAKNVAGKKWLRLFLKRHPELARRKAQMMNPARAQKLNKIIVGDHFSKYKSVLDRLGIEHKPESIYNIDEKNCRISLHHQQQVLTAKGRKRVHQIANEHAESVTVVGCGNAIGSAIPPMILFKGKRLKPEFQDNLPPGSLVKMTPKGSMTTGTFIEFINHLNKYRTSGPCLLIFDGAKCHLDYTIVEEAEKCGITLYCLPSNTTHELQPMDKSVYRSFEHHWDQELIKYVSQHPERTLNKTSFNVILSQVWPKCMTITNISNGFRATGLYPYNPDAIPEEAFAPSALSELPNPTNSENISVLSDRTGEQDISTANVEDSDGSGTDTENLPLSLLLNNPNARTPHKIDNQSTTCEIHGFLPTPKFKVAAAAPRKKSLNYRAQEVTKDLFGNNAINSTSQITVPSSRAEDVPGTSSVITINTKTPKSHSVTGYIPAQAAVAATRKQTSVKTASLTADKLTGSKLKRNDNKPSWYCPACKEDRVDDMRQCLSCGVWYHEVCVGLTPADKIFYCSGDCLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01220597;
- 90% Identity
- iTF_01161294; iTF_00171702; iTF_00171700; iTF_00171701;
- 80% Identity
- -