Sinf019207.1
Basic Information
- Insect
- Sesamia inferens
- Gene Symbol
- clz9
- Assembly
- GCA_037179545.1
- Location
- CM073931.1:21609722-21611125[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-08 1.7e-05 26.0 0.0 2 36 9 42 8 49 0.88
Sequence Information
- Coding Sequence
- ATGGCACCAAGAAAAGACTACACAACAGAACAAATGGCCAAGGCTATCGAAGAAGTAAGAAAAGGAGAAAAAATATCTGTTGCAGCTACAAGATATGGTGTCCCAAGGATTACTTTGCATAATAAAATCACCGGAAAAAGCCCTGTTGATTGTAATCTTGGTCCAGCTACTGTACTTTCACATGAGGAAGAAAATATACTAGTGAGATGGGTATGCTTTATGGCTGAAAAACATTTCCCTGTGACCAAAGAGCAATTGCTTGATAGTGTCCAGAAAATAATATCTGAGAAAAATTTAGATTCCTGTCCGTTCACAAACAATCGGCCAGGAAAAAAGTGGTActctttgtttttaaaaaggcaTCCAGATCTCTCTGAACGCACAGCGCAGAATTTAAGCAAAGCGAGAGAAGAGGTCACAGAAGATGACATACTCCGTTGGTTTGATGTAATAAAAAGTTACCTTGAAAATAAAGGTTTGCTTGAAGTGATAAATGACCCTGAAAGAATTTTCAATTCTGATGAAAGCGCATTTTATTTACAACCAAAAGCTGGACGAGTCCTAGTGCGTAAAGgcgaaaaaaatgtttatacttCATCAGGAGACGAGAAAGAAAATTTAACTGTGTTGGTTACTGGGAACGCTGCTGGAGTTTTAGCTCCACCAATGATAGTATACCCCTATGAGCGTTTACCTGCCGTAATTGCTAATAGCGTACCAAAAGATTGGTGCATAGGCAGGTCAGATACAGGCTGGATGTGTGCAAGAACTTTTTATGAATACATCACTAATGTATTCAATCCAtggattgaaaaaaataatatacctaaacCAGTCATATTATTCTTGGATGGTCATAGATCACACATGACCCTGCATTTATCAGATTTTTGTAAAGCTAATGAGATTGAAGTTATCTCTCTATATCCTAACTCGACACATCTACTTCAGCCAATGGATGTTGCGGTGTTCAGGCCTTTAAAGATATCGTGGCAGAATCAAGTGAAAAGATGGAAAATCGATAATCCAAAACAAACAATGAAAAGAGAGCATTTTGCTCCAAACTTTGAGGCAGCTTTGCGAAACATTGCCACTGATACAATAAGAAACGGATTTCGAAAAAGTGGGCTTTTCTCCTTTGGTCCAGAATGCGTCGATATGAACAAAATAAGTTCACACAATCGTGCTACAGTTTCCACATCagcattagaaaaaaaaattgacacgaCAAAACAGTTTATGAATATCTTGGAATCAGAAATAAGAAGCTTGTTCACAAATGAAAAATTGAAGTTATTCACCAGGCTGTACTATATTCCCAGAGCTAACGTTGAGGACCAGCTTCCAAATGAAGATCTGTCGTTATATATCATCTGGGCTAAAACTAAAgactatttaaattaa
- Protein Sequence
- MAPRKDYTTEQMAKAIEEVRKGEKISVAATRYGVPRITLHNKITGKSPVDCNLGPATVLSHEEENILVRWVCFMAEKHFPVTKEQLLDSVQKIISEKNLDSCPFTNNRPGKKWYSLFLKRHPDLSERTAQNLSKAREEVTEDDILRWFDVIKSYLENKGLLEVINDPERIFNSDESAFYLQPKAGRVLVRKGEKNVYTSSGDEKENLTVLVTGNAAGVLAPPMIVYPYERLPAVIANSVPKDWCIGRSDTGWMCARTFYEYITNVFNPWIEKNNIPKPVILFLDGHRSHMTLHLSDFCKANEIEVISLYPNSTHLLQPMDVAVFRPLKISWQNQVKRWKIDNPKQTMKREHFAPNFEAALRNIATDTIRNGFRKSGLFSFGPECVDMNKISSHNRATVSTSALEKKIDTTKQFMNILESEIRSLFTNEKLKLFTRLYYIPRANVEDQLPNEDLSLYIIWAKTKDYLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01280201; iTF_00649041; iTF_00237467; iTF_00373940; iTF_00237468;
- 90% Identity
- iTF_00237467;
- 80% Identity
- -