Sinf036688.1
Basic Information
- Insect
- Sesamia inferens
- Gene Symbol
- -
- Assembly
- GCA_037179545.1
- Location
- CM073942.1:2642215-2644349[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-10 1.3e-07 32.8 0.0 1 41 15 54 15 57 0.89
Sequence Information
- Coding Sequence
- ATGCCGCGACACAGGGAAAGAACCACAACGAAAGGAAAATGGACAAAAGAAGAGTTAGCAAAGGCTCTTGAAGCTGTTAGTGCAGGGAATTCTTTAAGGTCAACTGCCAAAAAGTACAGCATCCCCTTCAGTACGCTACAAGAGCGCATCAAGAAGAATATTCCAGTTACAGGTCCTTCTCTAGGAAGACATTCTACTTTTTCGCCAGAAGTAGAGAAGAGTATGGCTGAGAATATAAAACTTCTAGCCAAACTTTTTTACGGCCTAAGTCCATTGCAAGTTCGTAATGCAGCTTTCATTTATGCCGAGAAACATAACATAAAACACAACTTCAACAGGGAGAGGAAGCTAGCAGGTAAAGATTGGCTCTATGGTTTTTTAAAGAGAAATCCTTCAATAACTATTCGCCAACCAGAGGCAACCAGTATGAATCGTGTGACAGCATTTAACAAAGATGAAGTTAACATGTTCTTTCAAAACTTGAAAGACGTTATGGAAAAACACAAGTTTACTGGATCTAAAGTGTACAATATGGATGAGACTGGCGTGACCACCGTGCAAGACCCTGGTACAATCATTGCCGAAAAGGGCCAGAAGAGAGTCGGATCAATTACCAGTTATGAAAGGGGAAAAAACATAACTATAATTTGCGCCATGTCGGCTTCAGGATCCTACATACCTCCAATGTTTATTTACCCACGGCAGAGAATGTCACCTCAGTTGTGCAAAGATGGTCCTACTGACGCTATTTACCACTGCTCCAAAAATGGCTGGACAAATGAAGAATTGTTTCTAATATGGCTCAAGCATTTTGTCAAATTTGCTAAACCATCTGCTGATGAACCTATCTTACTCATATTAGATAACCATTACAGCCACTCATCTTATGCAGCATATATGTATTGTCGAGAAAATTTTATTGTTGTGGTCTCCATTCCACCCCACACCTCGCACAGGATGCAGCCTCTAGACGTGGCGTTTTATGGACCCCTAAAAAACGCGTTCAGGAAGGAGtgtgatttatttatgaaaagccacgCCCTGCAAAAAATTACTCCGTTTGAAGTGGCTTCTATATTAAACAAAGCCTACTGTAACACAGCAACAATACAAAAAGGGGTGTCTGGGTTTAAAACAACTGGAATTTTTCCCATTGACCCCAGTATTTTTGGAGAAGAAGACTTCCTGGCCTCAAACTATCTaaacGACTTAGTAACAGTCGACCAAAACGAAACTATGGACCAAGATCAAGCAGCAACTGCGCCTGAAGTGAATAGTCTACCAAAAACAAATACTCCAATTCAGACCCAAGGACATCTGCCAACAACAGCACCTGAGGTCAATCGTTTGCCTAGTACTTCAGTTCAGATTACTGCAAATCTTTCTGACATTACGAATATTCTTCCAGAAGGAAATATTGGCAACGTGACTCCAAGTAAAACTTTATTATCTCCATTGCCACTTCCAAAAACGACTGCTGAACGTGCAAGCACCAAACAGCATTCTGCAATCATGACAGCCACACCTATGAAAAAGGTACTAGAAAACAAACTAAAAAAGAAAGAGGAAAAACAGTTAAAATTAAACcagaaacttaataaaaatatgaaaataaatactaaCCCTAAGGCAACCAAGAAAACAACTCAAAAGAAAAATGCtggtataaatattaaaaaaagacagCGCAAGAACACAACTTCAAAGTCCTCTGAAGAGTTTTCGTCTTCAGATGACGAAATTTTGTCTACCAAAAGAAAGAAACTTCAATTAAAGTCTCCTGAGACAAATATAACACATGAAACTTCTCCAAAAAATAGAGAATTTTGTTCAATTTGTAAAGAGTTCGGAAAGAATGAAGTATGGTATAGATGCCGAAGTTGTGGGCGGTGGACTCATGAAGAATGCAGTGGTGCTGATTCCCCCGAGTCCTATGTATGCGATTACTGTGATAGCAAGCGTAAGGTTCTCAGACGTTTcaatttttga
- Protein Sequence
- MPRHRERTTTKGKWTKEELAKALEAVSAGNSLRSTAKKYSIPFSTLQERIKKNIPVTGPSLGRHSTFSPEVEKSMAENIKLLAKLFYGLSPLQVRNAAFIYAEKHNIKHNFNRERKLAGKDWLYGFLKRNPSITIRQPEATSMNRVTAFNKDEVNMFFQNLKDVMEKHKFTGSKVYNMDETGVTTVQDPGTIIAEKGQKRVGSITSYERGKNITIICAMSASGSYIPPMFIYPRQRMSPQLCKDGPTDAIYHCSKNGWTNEELFLIWLKHFVKFAKPSADEPILLILDNHYSHSSYAAYMYCRENFIVVVSIPPHTSHRMQPLDVAFYGPLKNAFRKECDLFMKSHALQKITPFEVASILNKAYCNTATIQKGVSGFKTTGIFPIDPSIFGEEDFLASNYLNDLVTVDQNETMDQDQAATAPEVNSLPKTNTPIQTQGHLPTTAPEVNRLPSTSVQITANLSDITNILPEGNIGNVTPSKTLLSPLPLPKTTAERASTKQHSAIMTATPMKKVLENKLKKKEEKQLKLNQKLNKNMKINTNPKATKKTTQKKNAGINIKKRQRKNTTSKSSEEFSSSDDEILSTKRKKLQLKSPETNITHETSPKNREFCSICKEFGKNEVWYRCRSCGRWTHEECSGADSPESYVCDYCDSKRKVLRRFNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338593; iTF_01338594; iTF_01338595; iTF_01338596; iTF_01338598; iTF_01338591; iTF_00654184;
- 90% Identity
- iTF_00654184;
- 80% Identity
- -