Efoe031954.1
Basic Information
- Insect
- Epiblema foenella
- Gene Symbol
- -
- Assembly
- GCA_963556455.1
- Location
- OY747114.1:16825113-16833957[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-10 1.1e-07 32.6 0.0 1 41 15 54 15 57 0.89
Sequence Information
- Coding Sequence
- ATGCCGCGACACAGGGAAAGAACCACAACGAAAGGAAAATGGACAAAAGAAGAGTTAGCAAAGGCTCTTGAAGCTGTTAGTGCAGGGAATTCTTTAAGGTCAACTGCCAAAAAGTACAGCATCCCCTTCAGTACGCTACAAGAGCGCATCAAGAAGAATATTCCAGTTACAGGTCCTTCTCTAGGAagacattctactttttcgcCAGAAGTAGAGAAGAGTATGGCTGAGAATATAAAACTTCTAGCCAAACTTTTTTACGGCCTAAGTCCATTGCAAGTTCGTAATGCAGCTTTCATTTATGCCgagaaacataacataaaacacAACTTCAACAGGGAGAGGAAGCTAGCAGGTAAAGATTGGCTCTATGGTTTTTTAAAGAGAAATCCTTCAATAACTATTCGCCAACCAGAGGCAACCAGTATGAATCGTGTGACAGCATTTAACAAAGATGAAGTTAACTTGTTCTTTCAAAACTTGAAAGACGTTATGGAAAAACACAAGTTTACTGGATCTAAAGTGTACAATATGGATGAGACTGGCGTGACCACCGTGCAAGACCCTGGTACAATCATTGCCGAAAAGGGCCAGAAGAGAGTCGGATCAATTACCAGTTATGAAAGGGGAAAAAACATAACTATAATTTGCGCCATGTCGGCTTCAGGATCCTACATACCTCCAATGTTTATTTACCCACGGCAGAGAATGTCACCTCAGTTGTGCAAAGATGGTCCTACTGACGCTATTTACCACTGCTCCAAAAATGGCTGGACAAATGAAGAATTGTTTCTAATATGGCTCaagcattttgtcaaatttgcTAAACCATCTGCTGATGAACCTATCTTACTCATATTAGATAACCATTACAGCCACTCATCTTATGCAGCATATATGTTTTGTCGAGAAAATTTTATTGTTGTGGTCTCCATTCCACCCCACACCTCGCACAGGATGCAGCCTCTAGACGTGGCATTTTATGGACCCCTAAAAAACGCGTTCAGGAAGGAGtgtgatttatttataaaaagccACGCCCTGCAAAAAATTACTCCGTTTGAAATGGCTTCTATATTAAACAAAGCCTACTGTAACACAGCAACAATACAAAAAGGGGTGTCTGGGTTTAAAACAACTGGAATTTTTCCCATTGACCCCAGTATTTTTGGAGAAGAAGACTTCCTGGCCTCAAACTATCTGTTGGGTACCAGAAACGACTTAGTAACAGTCGACCAAAACGAAACTATGGACCAAGATCAAGCAGCAACTGCGCCTGAAGTGAATAGTCTACCAAAAACAAATACTCCAATTCAGACCCAAGGACATCTGCCAACAACAGCACCTGAGGTCAATCGTTTGCTTGGAATTAGTACTTCAGTTCAGATTACTGCAAATCTTTCTGACATTACGAATATTCTTCCAGAAGGAAATATTGGCAACGTGACTCCAAGTAAAACTTTATTATCTCCATTGCCACTTCCAAAAACGACTGCTGAACGTGCAAGCACCAAACAGCATTCTGCAATCATGACAGCCACACCTATGAAAAAAGTACTAGAAAACAAACTAAAAAAGAAAGAGGAAAAACAGTTAAAATTAAACCagaaacttaataaaaatatgaaaataaatactaaCCCTAAGGCAACCAAGAAAACaactcaaaagaaaaatgctgATGACGAAATTTTGTCTACCAAAAGAAAGAAACTTCAATTAAAGTCTCCTGAGACAAATATAACACATGAAACTTCTCCAAAAAATAGAGAATTTTGTTCAATTTGTAAAGAGTTCGGAAAGAATGAAGTATGGTATAGATGCCGAAGTTGTGGGCGGTGGACTCATGAAGAATGCAGTGGTGCTGATTCCCCCGAGTCCTATGTATGCGATTACTGTGATAGCAAGCAGCTCGTGGCAGAAGTGGACGGCATTTCTGAAATTGTTGGAGAGGTGGACGACATTGCTGGAGAGGTGCTCAATGATATTGGTGAGGTGGACGATATTGTTAGAGAAATAGACGATGTTAGGATGAAGACTAGGTACTATCGCTACGGACTCTCAAAGAAGGAACATTGGTCTGGCTTTACCACCCAGTACGATGTTGACAAAATAATTATGATGTTACCGtttttagtgtga
- Protein Sequence
- MPRHRERTTTKGKWTKEELAKALEAVSAGNSLRSTAKKYSIPFSTLQERIKKNIPVTGPSLGRHSTFSPEVEKSMAENIKLLAKLFYGLSPLQVRNAAFIYAEKHNIKHNFNRERKLAGKDWLYGFLKRNPSITIRQPEATSMNRVTAFNKDEVNLFFQNLKDVMEKHKFTGSKVYNMDETGVTTVQDPGTIIAEKGQKRVGSITSYERGKNITIICAMSASGSYIPPMFIYPRQRMSPQLCKDGPTDAIYHCSKNGWTNEELFLIWLKHFVKFAKPSADEPILLILDNHYSHSSYAAYMFCRENFIVVVSIPPHTSHRMQPLDVAFYGPLKNAFRKECDLFIKSHALQKITPFEMASILNKAYCNTATIQKGVSGFKTTGIFPIDPSIFGEEDFLASNYLLGTRNDLVTVDQNETMDQDQAATAPEVNSLPKTNTPIQTQGHLPTTAPEVNRLLGISTSVQITANLSDITNILPEGNIGNVTPSKTLLSPLPLPKTTAERASTKQHSAIMTATPMKKVLENKLKKKEEKQLKLNQKLNKNMKINTNPKATKKTTQKKNADDEILSTKRKKLQLKSPETNITHETSPKNREFCSICKEFGKNEVWYRCRSCGRWTHEECSGADSPESYVCDYCDSKQLVAEVDGISEIVGEVDDIAGEVLNDIGEVDDIVREIDDVRMKTRYYRYGLSKKEHWSGFTTQYDVDKIIMMLPFLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338592;
- 90% Identity
- iTF_01338593; iTF_01338594; iTF_01338595; iTF_01338596; iTF_01338598; iTF_01338591; iTF_01338592;
- 80% Identity
- -