Sinf003572.1
Basic Information
- Insect
- Sesamia inferens
- Gene Symbol
- -
- Assembly
- GCA_037179545.1
- Location
- CM073922.1:31013407-31018281[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-11 6.4e-09 37.0 0.1 1 39 61 99 61 104 0.94
Sequence Information
- Coding Sequence
- ATGGAACGAAGTCTTTTGGGTCTAAAGCTAAGCGGCAAAGTCAGAAACCAAGATATCAGCAAGATCAGCAAGGTACCAAACATAACAAAGATGCCAGAAATGGAAATGAGCTGGACATGTCCAAAAATCACCTGGAATCTCGCTTTATCGCACACAATGCCCCCCAAGCGAGCATTGTGGTCTGAAGAGAAGCTAGTGGCAGCAGTCCAAGCAGTACAATGTGGACGGCTGAGTACATACAAAGCTGCCGTAAGGTACCAAGTGCCCAGAAGAACTATAAGAAACCATTTCAAGACcgccagtttaaaaaaaactttaggcCGAAAACCTTTATTTAATGACGAACAAGAAGCTGAACTCGTGAGTAGAATTATGAGATTTGCTGCGATAGGATTACCTGTTACACCACAAATTCTCCGCCAGTTAGTCTTTAAATTTTGCGAGGTAAATCACATGAAGCATCCCTTCAATCAACAAGCCAAAGTTGCTGGTAAGGATTGGTTTCTAAACTTCATGAAGAGACATCCGGAGATATCACGTAGAAAGGCGCAGTTCATGAACGTGGCTAGAGCTCAAAAGTTAAACAAATTTATCGTAGATGATCATTTCCAGAGACTGAACGAAGTTTATGATAAATTGGATATTAAAACTCGTCCTGAGAAGATTTACAACATGGATGAGAAAGGCTGCCGCCTAACGATTCACCATCAGCAGACTGTTTTGGCACAAAAGGGAGCCAAAAGAGTACATTTACAAGCTTCGGAACACGCCGAAAGTGTTACCATCGCCGGTTGTGTTAACGCACTTGGTACTAGCATACCACCAATGATAATTTTCAAAGGCAAACGTTTGAAGCCTGAGTTATATGACAATTTACCACCGGGATCACTAGTAGAAAAATCTGCCAAGGGTTATATGACTAACGAACTGTTCATAGAGTTTTTGAAGCACTTAGCCCGATACAAAACTCCAGGAAAGTGTCTCTTAATATTTGATGGGGCAGCTTGCCACTTAGATCTATCCATCGTAGAAGTTGCAGATTCTCTTGACATAGCATTGTACTGTTTGCCTTCAAATACAACGCATGAACTGCAACCACTTGACAAAGCTGTCTATAGATCATTTGAACACCACTGGGATTCAGAACTTTTATTATTCATGGAACAAAATCCAGAGAAAAAACTAACAAAGGCACGCTtcaatattatatttacaacTGTCTGGTCTAAATGCATGACACATAGTAACATAACAAGCGGTTTTAGGGCGACTGGTCTGTATCCATTTAATCCGCGCGCTATTCCGGAAACAGCTTTTGCTCCATCTGTATTGTCGGAAGCACCAGCTCCTGTTCCAGACGTTGTAGCTGTAGAACATTCACCACCACGCGCTCCATCCAGGCAAATGGCTCCCGAGACGCCTCAGCCATCGACATCGATGCAAGGACAAACAATTGATCATACCCCAAAAAGATCATCCGAAATGTTTTACAGAATGGTTTACGGTAGTTCCAGCTCTGATGATGAGGATAATGTACCCCTCGCTCAAGTAAAAAGAACATCATTTAAGCAACTCCTGCCTACACCAGCTAAAAACACGGAAAAGACACCAAAAGTGAGAAGAAAGGCCATCAATTATAGAGGAACACCAGTTACCAAAGACCTGTTCAAtaagaaaatagaaaaaaagaccTCAAAAATTACAAAGTCCAGAGGAGCTGAGAGCAATAAAGAAAATAGAGAAAGTTGGTACTGTCACGCGTGTGGCCAGGACCAAGAGACTGCCATGAGGATGTGTTGCAAATGCAGCAAGTGGTACCACGAGGAGTGCGTTGGTTGGTCAGAGGAGGACGTCGATGCTTTTGAGTGTCCAGATTGTtcctaa
- Protein Sequence
- MERSLLGLKLSGKVRNQDISKISKVPNITKMPEMEMSWTCPKITWNLALSHTMPPKRALWSEEKLVAAVQAVQCGRLSTYKAAVRYQVPRRTIRNHFKTASLKKTLGRKPLFNDEQEAELVSRIMRFAAIGLPVTPQILRQLVFKFCEVNHMKHPFNQQAKVAGKDWFLNFMKRHPEISRRKAQFMNVARAQKLNKFIVDDHFQRLNEVYDKLDIKTRPEKIYNMDEKGCRLTIHHQQTVLAQKGAKRVHLQASEHAESVTIAGCVNALGTSIPPMIIFKGKRLKPELYDNLPPGSLVEKSAKGYMTNELFIEFLKHLARYKTPGKCLLIFDGAACHLDLSIVEVADSLDIALYCLPSNTTHELQPLDKAVYRSFEHHWDSELLLFMEQNPEKKLTKARFNIIFTTVWSKCMTHSNITSGFRATGLYPFNPRAIPETAFAPSVLSEAPAPVPDVVAVEHSPPRAPSRQMAPETPQPSTSMQGQTIDHTPKRSSEMFYRMVYGSSSSDDEDNVPLAQVKRTSFKQLLPTPAKNTEKTPKVRRKAINYRGTPVTKDLFNKKIEKKTSKITKSRGAESNKENRESWYCHACGQDQETAMRMCCKCSKWYHEECVGWSEEDVDAFECPDCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338537; iTF_01338538; iTF_01338541; iTF_01338542; iTF_00794324; iTF_01338566; iTF_00766347; iTF_00766345; iTF_00766379; iTF_00984979; iTF_00794327; iTF_00457952; iTF_00457954; iTF_00751977; iTF_00751970; iTF_00751976;
- 90% Identity
- iTF_00794324;
- 80% Identity
- iTF_01338538;