Gpyl013296.1
Basic Information
- Insect
- Glyphodes pyloalis
- Gene Symbol
- -
- Assembly
- GCA_037074685.1
- Location
- JAYKKO010000012.1:8909074-8910699[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-11 4.9e-09 36.7 0.1 1 40 9 48 9 52 0.94
Sequence Information
- Coding Sequence
- ATGCCCCCGAAACGAGCATTGTGGTCTGAGGAAAACCTGGAAGCGGCGGTACGAGCAGTACAGTGTGGACGGCTGAGCACTTACAAAGCTGCCGAAAGGTACAAAGTGCCCAGAAGAACTATCAGGAACCACCTTCAGACCGGCAGTTTAAAAAAAGTCTTGGGTCAGAAACCTTTACTTAGCGACGAACAAGAGACTGAACTTGTGAGTAGAATTTTGAGGTTTGCTGAAATAGGTATACCCGTGACACCAATTATTCTCCGACGCTTAGTCTTCAAATTTTGCGAGCTAAATAACATCAAGCATCCCTTCAATCAACAAGATAAAGTTGCTGGTAAAGATTGGTTTAAGAAATTTATAGAAAGACATCCGGAGATCGCACGTAGAAAGGCTCAGTTTATGAACCCAGCTAGGGCTCAAAAACTGAATAAATTTATCGTAGACGATCACTTTAAGAGACTGAATGAAGTTTATGATAAATTGGATCTCAAAACTCATCCTGAGAAAATCTATAACATGGATGAAAAAGGTTGCCGCCTGACGATTCACCACCAGCAGACTGTAGTGGCAAAAAAAGGGGCCAAAAGGGTCCATTTACAGTCATCGGAACACGCTGAAAGCGTAACAATCGCCGGTTGTGTCAATGCACTTGGTAGTGCCCTACCGCCCATGATAATTTTTAAAGGCAAACGTTTGAAACCTGAATTATATGACAACTTACCACCAGGATCATTAGTAGAGAAATCTCCTAAGGGTTATATGACAAATGAACTCTTCAAAGAGTTTTTGAAGCACCTAGCTCGATACAAAAGTCCAGGCAAGTGTCTTCTAATATTTGACGGGGCAGCTTGTCACTTAGACCTATCTATCGTGGATGTTGCAGATTCACTTGATATAGCACTATACTGTTTGCCCTCAAATACCACACATGAACTGCAACCACTCGATAAGGCGGTTTATCGATCATTCGAACATCATTGGGATACAGAACTTTTGTTATTCATGGAACAAAATCCAGATAAAAAACTGACAAAGGCACGGTTCAATATTATCCTTACTAATGTTTGGTCTAAATGCATGACAAATATTAACATAACTAGCGGTTTTAAAGCGACTGGTTTGTATCCGTTTAATCCTCAAGCTATTCCGGAAACAGCATTTGCCCCGTCATTACTGACAGAAATACCAGCTCATGTACCTGATGCTGTTGATGTAGAAAATTTGTCGCCTTGTATCGCCCCCAGGCCAATAACCCCCGTGATCTCCAAACCATCGACGTCAATGCAGGAAAAAACAAATGATCATACCCCGAAATTAACACCTGAAAGATTTTACAGAATGGTTTACGGTAGTTCCAGTTCCGATGATGATGAGGATAATATACCGCTTTCGCAAATTAAAAGAACAACGTTTAAGCAGCTCATGCCTACACCAGCTAAGAACATTGAAAAGACACCAACAGTAAGAAGAAAGGCCATAAATTACAGAGGAACTCCAGTGACCAAAGACCTgttctacaaaaataaaatagagaaaaagaccaaaaaaataaaaaatattagagatgATACTAGCactaaagaaaataatgagAGTTGGTACTGTCACGGATGTAAGCAGGACTAA
- Protein Sequence
- MPPKRALWSEENLEAAVRAVQCGRLSTYKAAERYKVPRRTIRNHLQTGSLKKVLGQKPLLSDEQETELVSRILRFAEIGIPVTPIILRRLVFKFCELNNIKHPFNQQDKVAGKDWFKKFIERHPEIARRKAQFMNPARAQKLNKFIVDDHFKRLNEVYDKLDLKTHPEKIYNMDEKGCRLTIHHQQTVVAKKGAKRVHLQSSEHAESVTIAGCVNALGSALPPMIIFKGKRLKPELYDNLPPGSLVEKSPKGYMTNELFKEFLKHLARYKSPGKCLLIFDGAACHLDLSIVDVADSLDIALYCLPSNTTHELQPLDKAVYRSFEHHWDTELLLFMEQNPDKKLTKARFNIILTNVWSKCMTNINITSGFKATGLYPFNPQAIPETAFAPSLLTEIPAHVPDAVDVENLSPCIAPRPITPVISKPSTSMQEKTNDHTPKLTPERFYRMVYGSSSSDDDEDNIPLSQIKRTTFKQLMPTPAKNIEKTPTVRRKAINYRGTPVTKDLFYKNKIEKKTKKIKNIRDDTSTKENNESWYCHGCKQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01338540;
- 90% Identity
- iTF_00751970; iTF_00751976;
- 80% Identity
- iTF_00751976;