Sinf045277.1
Basic Information
- Insect
- Sesamia inferens
- Gene Symbol
- -
- Assembly
- GCA_037179545.1
- Location
- CM073947.1:21629940-21633385[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-11 5.6e-09 37.2 0.0 1 38 7 45 7 50 0.89
Sequence Information
- Coding Sequence
- ATGTCAAACAAAAAGTACTCCAACGAGGACCTCGCCAAAGCTTTAGAGGATATAAAAAATGGATCCATGACCATATATCGTGCATCTAAGGTATATAACATACCCAACCAGACCTTGcatgataaaattaataaaaaatacaaaaaacaagagTCAGCAGGAGCTCCAACAGTCCTGTCATCGACAGAAGAAGGTTTGTTGGTAAAATGGGTACTGCATATGGCCGAAATTGGATTTCCAGTTACGAAAGATCAACTGCTACACTCGGTAGCTAAATTACTGATAGGATTGAAGCGACAAAATCCATTCAAGGACGGAGTCCCTGGCAGACATTGGTACGAGGCCTTTCTGAAAAGAAACCCAATGATAAGCAAGAGAGTATGTCAAGCATTGACTACTGCCCGTGTAAACGCTACTGAAGAAAAAATAAGGGGCTGGTTTCAACGAGTCCGAAAATATTTCGAAGACAACAATCTTATGGCTGTGTTGGAAGACCCCGCACGCGTGTTCAACTGCGATGAGTCTGCCTTTTTTTTGTGTCCGAAAGGTCAACCAGTCCTTGCCAGAAAGGGGGTGAAAAATGTTCACTGCCGTTCTGGTAATGATGATAAAGAAAATCTAACACTCTGTCTGGGCGCGTCAGCTGACGGGAAACTAATGCCGGTATTAGCATTATTTCCGTATAAAAGGATACCACAAAATATATTGTTGAAATATCCTAAGGATTGGGCCATCGGACGTACTGACTCGGGATGGATGACATCAGAGGCATTTTATGAGTACGTGGCTAATCAATTTGAGCCATTTTTGACGAGAGAACATATTACAAGACCTGTAGCTTTGTTCCTGGATGGACACGTCTCTCATCTTTCGCTCCCAGTATGCGaattttgtaaagaaaaaaacattatacTGATAGCTCTGTTGCCTAGCGCCACACATGCTTTACAACCTATGGACGTCGCAGTATTTCACAGTCTCAAAAACGCTTGGAGTAAAGCAGTACATACTTGGAGGATGGAAAATAATGGCAGACGCTTGAAGCGAGAAGATTTTGGTCCCGTGCTTGAAAAAGCCATCAAAACGACTCTGCGACCAGAAATTATACAAAATGGCTTTCGAAAGGCCGGCCTGTATCCCTTCGACGAAAATGcagttaattataaaaaaatacctaaatctTCTGCGGCAACTGCGTCAAGTTCTGGTACAAGTACACCTACAAGTTTGAACTCTTTAGAAAGCAGCAAGCAGTTACAATCTAAAGATTTTATTAAGTGGTTCGAGATGAATTTAGATGCTCATAAATTAAATGAGTTCCGGCAATGTTCTGGAGAATGGACAGGCAACGTAAAAGACGACAGTCTGTACTATTTCTGGAAGCAGACCTGCACGAGTCATACACCAACACCAGATTCAATGAGTCTAGGCAACACCACTCTAGTGGAAAATAACTGTACGTTAGCCGATCTTGACCTTAATTGGATCAATGAAGACACGATAGTTGAATCAGCTTTTCTTAACGAGATAACTTTGACCAGTGCTTTACCCTGTTCAACTCCTAAAAGTCCAAGTATTATTGAGACCATTACTTTTAAAGAGACGCAACAAGAGTTAGTAACAAATTATAAAGCGGCAGGTGATTTGCTAGATGATTCAAGCAATATAATTGGTAATATATCGAAAATTTCCGAGCAGGATAACGTTAGTAATGTTCCCGTAATAATAGTACCGCCCTCAGAAACTATACTTCTCACACAAGAAGCTATTCTGGAAGAATCCTCAGTTGTCATACAACAAAATGACCCTGGTGATGTTCCTACAATCATACCTCCCAAAGAAAAAGTAGCAAATAGAGACAACGATAAATTATTTAAGCCGTCGGGAACATTACCAACCAACAATTCAACTTTTTCTGTGACTACGCCAGTTCCTCAAGAAAGATTCTCACCACCTAATGAAACGGATAGAAAAGTAGAAAATAGCAAACCTTTCATTTCCAAAGAAGCACTAACTTCTCAATTAGCATCTGTAGTACAAAATGATATGAATATAGCTGCTGATAAACACGAAAAATGCGTAACCCCAAACAAtcagactaaaaaaaaatcatccaaATCTGGTGAACTATCTTCATCTCACCAAACACCTATAGAGATACTTACTAGATCTGCTGATGATACATTGGAATCGTTTCCGATTTCGACGTctcagaataataaaaaatatgaagatAGTTCTACCAATATTCAGAATTCCGCTACTGAATCAAATTCCCCTACTCAAGATCAAAGCGAAAATTctcaaaattccaaaaaaactgCATTTCCAACACCCTTCAAAAATGCTTTGTTGTGGCCAGAAACTCCGTCGACCAGTAAAGAAAAACGGATTTTTCTGCATATGCCGGAATCACCAGCACCCATTTACGGAATTACCTGGAGAGTCAAATTTTATACCGTAATAACGGACATTTACTAG
- Protein Sequence
- MSNKKYSNEDLAKALEDIKNGSMTIYRASKVYNIPNQTLHDKINKKYKKQESAGAPTVLSSTEEGLLVKWVLHMAEIGFPVTKDQLLHSVAKLLIGLKRQNPFKDGVPGRHWYEAFLKRNPMISKRVCQALTTARVNATEEKIRGWFQRVRKYFEDNNLMAVLEDPARVFNCDESAFFLCPKGQPVLARKGVKNVHCRSGNDDKENLTLCLGASADGKLMPVLALFPYKRIPQNILLKYPKDWAIGRTDSGWMTSEAFYEYVANQFEPFLTREHITRPVALFLDGHVSHLSLPVCEFCKEKNIILIALLPSATHALQPMDVAVFHSLKNAWSKAVHTWRMENNGRRLKREDFGPVLEKAIKTTLRPEIIQNGFRKAGLYPFDENAVNYKKIPKSSAATASSSGTSTPTSLNSLESSKQLQSKDFIKWFEMNLDAHKLNEFRQCSGEWTGNVKDDSLYYFWKQTCTSHTPTPDSMSLGNTTLVENNCTLADLDLNWINEDTIVESAFLNEITLTSALPCSTPKSPSIIETITFKETQQELVTNYKAAGDLLDDSSNIIGNISKISEQDNVSNVPVIIVPPSETILLTQEAILEESSVVIQQNDPGDVPTIIPPKEKVANRDNDKLFKPSGTLPTNNSTFSVTTPVPQERFSPPNETDRKVENSKPFISKEALTSQLASVVQNDMNIAADKHEKCVTPNNQTKKKSSKSGELSSSHQTPIEILTRSADDTLESFPISTSQNNKKYEDSSTNIQNSATESNSPTQDQSENSQNSKKTAFPTPFKNALLWPETPSTSKEKRIFLHMPESPAPIYGITWRVKFYTVITDIY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00358469; iTF_00358466; iTF_01338534; iTF_01338536; iTF_01338533; iTF_01280140; iTF_01280141; iTF_01020177; iTF_01338546; iTF_01338559; iTF_00751979; iTF_00751978; iTF_01338544; iTF_01338545; iTF_00710945; iTF_00896704; iTF_00896705;
- 90% Identity
- iTF_00358469;
- 80% Identity
- -