Scos003287.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- lolal
- Assembly
- GCA_949820665.1
- Location
- OX463295.1:39010573-39030506[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 5.7e-11 2.9e-08 35.1 0.1 3 39 22 57 20 62 0.90 2 7 5.7e-11 2.9e-08 35.1 0.1 3 39 70 105 68 110 0.90 3 7 6.4e-11 3.3e-08 34.9 0.1 3 39 118 153 116 158 0.90 4 7 6.4e-11 3.3e-08 34.9 0.1 3 39 166 201 164 206 0.90 5 7 2.7e-10 1.4e-07 32.9 0.1 3 39 214 249 212 254 0.90 6 7 2.7e-10 1.4e-07 32.9 0.1 3 39 262 297 260 302 0.90 7 7 1.7e-26 8.9e-24 85.0 0.2 3 100 310 403 308 411 0.93
Sequence Information
- Coding Sequence
- ATGACGCAACAATACAGCCTGCGATGGAACAACCACCAGCCCAACTTCATATCCATGTTCACGTCGCTTCTGAACACCCAGACGCTGGTGGACGTGACCCTGGCTGCGGAGGGCAAGCATCTGCAGGCTCACAAGGTGGTGCTCTCGGCCTGCAGCAACTACTTCCAGGTGAGCTGTAGGGCTCCAGTGTTCATATCCATGTTCACGTCGCTTCTGAACACCCAGACGCTGGTGGACGTGACCCTGGCTGCGGAGGGCAAGCATCTGCAGGCTCACAAGGTGGTGCTCTCGGCCTGCAGCAACTACTTCCAGGTGAGCTGTAGGGCTCCAGTGTTCATATCCATGTTCACGTCGCTTCTGAACACCCAGACGCTGGTGGACGTGACCCTGGCTGCGGAGGGCAAGCATCTGCAGGCTCACAAGGTGGTGCTCTCGGCCTGCAGCACCTACTTCCAGGTGAGCTGTAGGGCTCCAGTGTTCATATCCATGTTCACGTCGCTTCTGAACACCCAGACGCTGGTGGACGTGACCCTGGCTGCGGAGGGCAAGCATCTGCAGGCTCACAAGGTGGTGCTCTCGGCCTGCAGCACCTACTTCCAGGTGAGCTGTAGGGCTCCAGTGTTCATATCCATGTTCACGTCGCTTCTGAACACCCAGACGCTGGTGGACGTGACCCTGGCTGCGGAGGGCAAGCATCTGCAGGCACACAAGGCGGTGCTGTCGACCTGCAGCACCTACTTCCAGGTGAGCTGTAGGGCTCCAGTGTTCATATCCATGTTCACGTCGCTTCTGAACACCCAGACGCTGGTGGACGTGACCCTGGCTGCGGAGGGCAAGCATCTGCAGGCACACAAGGCGGTGCTGTCGACCTGCAGCACCTACTTCCAGGTGAGCTGTAGGGCTCCAGTGTTCATATCCATGTTCACGTCGCTTCTGAACACCCAGACGCTGGTGGACGTGACCCTGGCTGCGGAGGGCAAGCATCTGCAGGCACACAAGGCGGTGCTGTCGACCTGCAGCACCTACTTCCAGGCGCTGTTCATGGACAACCCGTCTCGGCACCCCATCGTGATCCTGAAGGACGTGACGTTTGCTGACCTGCGCACCATGGTGGACTTCATGTACTACGGCGAGGTTCACGTCACCGAGGAGCAGCTGCCACAGGTGCTGGACACAGCGAAAACACTCAAAATCAAGGGACTGACTGAGATGCCGGACTCGACGTCAGTGACGCGCTCGCAGGGCACGTCAGCTGATTTCCCATCAGGCGAGCTGCAAGAGCAGCGCCACCTAGCGTCGCCGGCGCACTCGCCACGCAGGAGGAACAAAGTCGCGGGCGAAAACTTGTACAAAATTTCGCAAATCCTCGAACTTGAAGAATTCATTCCAGTTAGTAATCAAGAGAAGCTGATCGGAAACCCTTTTCCCCAGACGCAGGAAAAGTTCGACTGGCTCGCTTCAACTGACGACCGGCGAGGAGGGGCGCGGGGAGGAGTGCGGGGCGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACGCTCAGCTCTGTGCCGCGCCGCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACTGGGGAGGAGGGGCGCGGGGAAGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACGCTCAGCTCCGTGCCGCGTCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACGCTCAGCTCTGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGCTCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCGGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACACCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACGCTCAGCTCTGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCGGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACACCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAAACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACTAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAGCTGACGACCGGGGAGGAGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGAGACTACCACGATCACCAGGTACATACACACAACTGACGACCGGGGAGGAGGCGGGGCGCGGCCCGGCCGAGCTGGTGCGGGGCGACGCCATCACACTCAGCTCCGTGCCGCGCCGCAGAGACTACCACGATCACCAGgCACAAGAAGCACAGAACATGAACGTGGAACAGTTAGGGTTAGAGGCGAATACAGCGGGAATGACGCAAGAAGAAAAGTACAATAAACAGAATGATAGATTGTACGCTGCGAGCTCTGAAGAAGCAGCAACAGGAGTTCCGCGGGTGCAACATGGGCACCATCCATCTTCAGTGATGGTCTGGTTGGGAGTCTCCTACTACGGGCCAACTGAGGTTTATTTTTCCGAAAACGGTGTCAAAACCAGTAACCAAGAAGCGGTTTTGGATCAGCATGTCAAAGACCTGCCCAACACGCTACTTTCAGGCCATCACTTCGTGTTCCAGCAGGATTCTGCGCCTGCATACAAAGCCAAGACCACGCAAGCCTGGTTCGAGCGTCAAAACATCGACTTTATAAGACACCTTTCTCCAGTCCGGACCTTAATCCTCTGGGCTATATTATTGTCAGGTCTGAAAGAGGAAGGTCTGTGCTAA
- Protein Sequence
- MTQQYSLRWNNHQPNFISMFTSLLNTQTLVDVTLAAEGKHLQAHKVVLSACSNYFQVSCRAPVFISMFTSLLNTQTLVDVTLAAEGKHLQAHKVVLSACSNYFQVSCRAPVFISMFTSLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQVSCRAPVFISMFTSLLNTQTLVDVTLAAEGKHLQAHKVVLSACSTYFQVSCRAPVFISMFTSLLNTQTLVDVTLAAEGKHLQAHKAVLSTCSTYFQVSCRAPVFISMFTSLLNTQTLVDVTLAAEGKHLQAHKAVLSTCSTYFQVSCRAPVFISMFTSLLNTQTLVDVTLAAEGKHLQAHKAVLSTCSTYFQALFMDNPSRHPIVILKDVTFADLRTMVDFMYYGEVHVTEEQLPQVLDTAKTLKIKGLTEMPDSTSVTRSQGTSADFPSGELQEQRHLASPAHSPRRRNKVAGENLYKISQILELEEFIPVSNQEKLIGNPFPQTQEKFDWLASTDDRRGGARGGVRGGGGGARPGRAGAGRRHHAQLCAAPQRLPRSPGTYTQLTTGEEGRGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHAHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDARPSWCGATPSHSAPCRAAETTTITRYIHTADDRGGGGARPGRAGAGRHHHTQLRAAPQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEGRGPAELVRGDTITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDARPSWCGATPSHSAPCRAAETTTITRYIHTADDRGGGGARPGRAGAGRRHHTQLRAAPQRLPRSLGTYTQLTTGEEAGRGPAELVRGDARPSWCGATPSHSAPCRAAETTTITRYIHTADDRGGGGARPGRAGAGRRHHTQLRAAPQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEGRGPAELVRGDAITLSSVPRRRDYHDHQRLPRSPGTYTQLTTGEEAGRGPAELVRGDAITLSSVPRRRDYHDHQAQEAQNMNVEQLGLEANTAGMTQEEKYNKQNDRLYAASSEEAATGVPRVQHGHHPSSVMVWLGVSYYGPTEVYFSENGVKTSNQEAVLDQHVKDLPNTLLSGHHFVFQQDSAPAYKAKTTQAWFERQNIDFIRHLSPVRTLILWAILLSGLKEEGLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -