Scos016308.1
Basic Information
- Insect
- Scrobipalpa costella
- Gene Symbol
- Bgb
- Assembly
- GCA_949820665.1
- Location
- OX463303.1:10877043-10878275[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-45 1.5e-40 139.8 0.1 1 95 33 120 33 125 0.95
Sequence Information
- Coding Sequence
- ATGCACACAATGAGTGACCCGGCGGCGCTGGCTGGGATGCTGCCCTTCGACTCCATCGGCCTCTACGAGCAGCCGAAGCCGAGGTTCATCTTCAAGATGCCCCGAGTGGTTCCTGACCAGAAGGGAAAATTTGAATCTGACGATCTCTTCAAAAGACTGAGCAGAGAAAGCGAGGTCCGTTACACAGGCTACCGCGACAGGCCCCCAGAAGAACGCCAGATGCGCTTCACCAGCGGCTGCCGGGAGGGACACGCTGAGATCGCCTTCACGGCCACCGGCACCAACCTACAGCTGGTCTTCGACCACTCCCCCTACAACAACCGCGGCTGCGACTTCCAGAAGGAAAATGGCAAGGTAAGCTGGTTTCAAATGCCTTCTTCAACTTCTCAGATATAA
- Protein Sequence
- MHTMSDPAALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKGKFESDDLFKRLSRESEVRYTGYRDRPPEERQMRFTSGCREGHAEIAFTATGTNLQLVFDHSPYNNRGCDFQKENGKVSWFQMPSSTSQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00164084;
- 90% Identity
- iTF_01425725;
- 80% Identity
- -