Basic Information

Insect: Scotopteryx bipunctaria
Gene Symbol: RREB1
Assembly: GCA_949320045.1
Location: OX439464.1:3860892-3866457[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.42 25 5.9 3.4 1 23 72 95 72 95 0.93

2 12 4.1 2.5e+02 2.8 0.1 1 22 124 145 124 145 0.93

3 12 0.023 1.4 9.9 0.1 1 23 272 294 272 294 0.97

4 12 0.0012 0.074 13.9 0.4 1 23 303 325 303 325 0.99

5 12 0.00077 0.046 14.5 2.0 1 23 331 354 331 354 0.97

6 12 0.0031 0.18 12.6 1.6 1 23 705 728 705 728 0.96

7 12 0.00026 0.015 16.0 1.3 2 23 919 940 918 940 0.97

8 12 0.026 1.6 9.7 5.3 1 23 946 969 946 969 0.97

9 12 0.11 6.6 7.8 1.2 1 23 1002 1026 1002 1026 0.93

10 12 0.71 42 5.2 0.7 1 23 1050 1073 1050 1073 0.92

11 12 0.0019 0.11 13.3 0.2 2 23 1113 1134 1112 1134 0.96

12 12 0.029 1.8 9.6 5.3 1 23 1140 1162 1140 1162 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.42	25	5.9	3.4	1	23	72	95	72	95	0.93
2	12	4.1	2.5e+02	2.8	0.1	1	22	124	145	124	145	0.93
3	12	0.023	1.4	9.9	0.1	1	23	272	294	272	294	0.97
4	12	0.0012	0.074	13.9	0.4	1	23	303	325	303	325	0.99
5	12	0.00077	0.046	14.5	2.0	1	23	331	354	331	354	0.97
6	12	0.0031	0.18	12.6	1.6	1	23	705	728	705	728	0.96
7	12	0.00026	0.015	16.0	1.3	2	23	919	940	918	940	0.97
8	12	0.026	1.6	9.7	5.3	1	23	946	969	946	969	0.97
9	12	0.11	6.6	7.8	1.2	1	23	1002	1026	1002	1026	0.93
10	12	0.71	42	5.2	0.7	1	23	1050	1073	1050	1073	0.92
11	12	0.0019	0.11	13.3	0.2	2	23	1113	1134	1112	1134	0.96
12	12	0.029	1.8	9.6	5.3	1	23	1140	1162	1140	1162	0.97

Sequence Information

Coding Sequence: ATGATGgtagAAATCAAAACAGAGGAGGCTTGCGAAGCCGAGGAAATGGAAAGGATGATTGTCGAACGCCAGGAGTTGAGGGGCACTCGAACCACCAGCATCGACAGCGACAACCGCTCCGACAGAAGCGAGGAAGATGACTGCCGGAGGGCCAGGAAACGAGCAGCATCTACCTCACCTTCCCCCATGCCCATGGACAAAAGAATCGCGCGGTTTGAATGCCCCAAGTGCCACCACAGATTCGAATCCGTCAACGCGTACGACATGCATCGCTTCACCGTCCATGGAGACGACGCTCGCTCCGGCTACGACGACCTCGTCGACTTCTCCGCCAAGAAGTTCCCCGAAATCACCCGAGGACTCCACAACTTTAGATGCGACCTCTGCATGAGAGATTTCGTCAACGCACAAGTCCTAGACATCCACCGAAAGACGTGCTCCCCTACCAGCAGAATACCCACGCCCGACCGCGAACGCAGAGAAGATTTCTTCGCGAAATTGGATCTTAGGAACCGGTCGTTCGGCATTCCGGGCACGTTGACTCCCCCTATGGAAAGGTTCACGCCAAAGTTCGACGATGGACATATCAGTAACGGCATACGGCATATCGACGCCGCTCGAGACTTGGCAGATATTCAATCGATACTCAACGTCACGTCAACGGGAAGCCTTTTAGAGAGACTCACTGGCAACAGAGTGAATTTAGAAAGTTCCGCACTGACACCGCCAGACACTATTGCGAAAGATCGCGAGCAGGAAGAGACGCAGGATAACTTCGCCGCTGAGTTTAGACGAATGAAACTACGCGGTGAGTTTCCTTGCAGATTATGCCCTGCTAAATTCCCGAACTTACGAGCCTTGAAGGGGCACAACAGAGTGCACCTTAGTGGCACCGGGCCTGGCCCTTATCAATGCAACATGTGCCCTCATGCGTCCTTGGACAAGGCAGCTCTGGTCAGGCACATGAGAACTCACAACGGTGACCGCCCGTACGAATGCGCTGTTTGCAACTACGCCTTTACCACGAAAGCCAACTGCGAGCGACACCTGAGGAACAGACACGCTAAAGTCACCAGAGAAGACGTAAAGCGTTCTATCATATACCACCCATCAGAAGATCCCAACAACGACGAAGTTAACTCAAAACTAGCTCGAGATGAGGTTAAGAGGTCACTCGCTTTCCATTCTCCACCAGAACTTGACAGACGTAATGAAAGCACTGGTCGCGATACTCCTGTTAGCCACCATTTCCCATCTAGCTTCATCTCCGACAGACACCCAGTCGCTGCACTAACGTCTAGGCCAATACCTGACCTAGCCCCACTTCCTCAAAGAGAAACAGAACCTTCCGGGCCGAAAATCACTGTCAAAAGCATCGGGCAACTGACGCAAATCCCGGAGTTCAGAGTGCCGGATCATGCGTTCAAAAACAATGATATCAAACCCGAAGTCTATGAAGAAGAGACTCCAGTAGACCTTAGCACAAGTGACAATAACTGTGATGTTCTCGATCTCAGCAAGAAGAAGCGTGACAGTGACAATGAAGAACTCAAAGTATTGACTCCTTCGCGCCCAGCTTTTGAACCTGATGCAGCATCAGTTGCTGCGACTGCTTTTGAAAAGACGAGGTTATTGCTCGCTCAGCAGAGACTTTTCGAAACCACTCTCCCAAAGATAGACCCTGCTTATTATGCCACTCAACTTACGCAACTTTACGCCGGAGCAGTTCCTGGATTACACGGACTTCCTCTCCCACCTTCCTTCCCTTACTTTCTTCAGCCCTCTTTTTTTCCCCACCCTACCGACTCTCCCGAGATGACCGAAATAAAGCAGCGTATCCAGAAGGAAATCATTCGAGGTCTTAGCATGTCTGGTGGACGTCTCGTCCCAAATGAACAAGACATTCTGCCTAAACAGGAACCTGAACCAGAGATCGAAGAGAAGCCAGCGCCGCTCGTGATCTCCCCAGTACCATCACCTCATTCAGAGTCTCCGCGGCCGATATCCAACAGCAACAGCATTGTGCCACAGACGGACTCCGTCAAAATGGTCATCAAAAACGGTGTTCTCATGCCAAAGCAGAAACAGAGGCGCTACCGTACAGAGCGACCATTTTCCTGCTCCCAATGTTCCGCTAGATTTACTCTGAGATCGAATATGGAGCGTCATGTGAAACAGCAACATCCTCAACACTGGAGTGTCAGGCGACCAGCTCCGAGGGCTCCTCCGCCATATCCATCATCGGATGCTTTAGCTGACCGCGTAAAGTTCGCGCTTCTAGCGCGTCACCTTGAAAGACCTCTTCAACAATCTGAACACTCACCCATTCGTCGCGATTCGGATGAAGTAGCTGACAACGAAGAAGATGAAGACGATGCCTTAGTCATTGATGAAGAACCGGAGATGGAATCGGAGGAGCATCCAGCTGCCAAGCGTGCCGCAGCGGAGATCCTCATGGCTACGTGTCAACAGGAGTTAAATAAGGACTTTGATGTCAAAATCGCTGGCAATCTTATCAGCAAGCCAGTTGCAGATAAGATTGAGACGGGAACGGACCCTATTCCATTAATCCAAGAGCCCTTACCTGTCCCGGTGGTGCCGACGCGAAGCGATGAGGAGGAAGATGAAGAAGGCTTAGTTGCTTCCACTAGTGAGGGCAATAATTCGGGAAGCGACGAAAATAAATCGGAATCCGACACTGGAGCTCAGCCACCGAAGAAACGCTCAGCATACAGCCTAGCACCAAACCGAGTCTCCTGCCCCTACTGCCACCGGAAGTTCCCCTGGTCATCTTCACTACGCCGCCACGTACTCACCCACACCGGACAGAAGCCCTTCAAATGCCCTCATTGCCCTTTGCTGTTTACTACTAAGTCTAACTGCGATAGACATTTGCTGAGAAAACATGGTGGGTCAGCAAGGGCTGTATTAGCTGAGCCTGTCCCTGATGCCATGTCCCCACCACAGCCAGTCAACGACATCCGAACGGTGCCGGAGAGGCCTTTCAAATGTGGCACTTGCCCAACCAGCACCTTCTCATCCATGGAGACTTTGAAGAAGCATATCTCCTCACGCCACGGTTCTGTAGAATCCCAACCCAGCTCACCTAACCCGGACAATCATGAGGAGACCCTGGACGGTATGGTGTTTAAGTGCCATCTCTGTGAAGCTGCTTACCATGATCGGAGTGGAGCTTTGAGTCATCTGGCCAATGTCCATGCTACGGAGTATGAGCAACTGGTCAGCAAAGGGGCATTGGACGGAACGAGCGACAAGAGTGAAaatactgatgatgatgacagagGAAAGTTTCCTGATCATGCTAATAGAAAGGTGGTTTGCGCGTTTTGCGTGCGTCGTTTCTGGTCTGCGGAGGACCTACGCCGCCACATGCGGACTCACTCCGGCGAGCGTCCCTTCGCTTGCGACCTCTGCCGGCGCCGCTTCACCCTAAAGCACAGCATGCTGCGCCACCGCAAGAAGCACCGGGAagagactgatgatgatgaggccTCGCCGAACACGAGCGACGAGAAAGTTAATGGCTACCGCTTCCAAGACGACGATTCCGGCAACGAGATACCAAACAACGTGAACAACAACAATTCTCCTCCCGCAGCACCCTACGAGAAGAAACTCCGTCTAGACATGACTTCTCGCAAATACTCCTCAGAGGAAAACGAAGGGGAGAACGGCAGCGACCTCATCGGGAAACTCCTAGGAATCCCCGACAAGACTATCAACAAACTCCTGTCTTCCGCAGACGAAGCAGCAAAGATCCTGGGAGTGAACAAATGA
Protein Sequence: MMVEIKTEEACEAEEMERMIVERQELRGTRTTSIDSDNRSDRSEEDDCRRARKRAASTSPSPMPMDKRIARFECPKCHHRFESVNAYDMHRFTVHGDDARSGYDDLVDFSAKKFPEITRGLHNFRCDLCMRDFVNAQVLDIHRKTCSPTSRIPTPDRERREDFFAKLDLRNRSFGIPGTLTPPMERFTPKFDDGHISNGIRHIDAARDLADIQSILNVTSTGSLLERLTGNRVNLESSALTPPDTIAKDREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHSPPELDRRNESTGRDTPVSHHFPSSFISDRHPVAALTSRPIPDLAPLPQRETEPSGPKITVKSIGQLTQIPEFRVPDHAFKNNDIKPEVYEEETPVDLSTSDNNCDVLDLSKKKRDSDNEELKVLTPSRPAFEPDAASVAATAFEKTRLLLAQQRLFETTLPKIDPAYYATQLTQLYAGAVPGLHGLPLPPSFPYFLQPSFFPHPTDSPEMTEIKQRIQKEIIRGLSMSGGRLVPNEQDILPKQEPEPEIEEKPAPLVISPVPSPHSESPRPISNSNSIVPQTDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPSSDALADRVKFALLARHLERPLQQSEHSPIRRDSDEVADNEEDEDDALVIDEEPEMESEEHPAAKRAAAEILMATCQQELNKDFDVKIAGNLISKPVADKIETGTDPIPLIQEPLPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGAQPPKKRSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAVLAEPVPDAMSPPQPVNDIRTVPERPFKCGTCPTSTFSSMETLKKHISSRHGSVESQPSSPNPDNHEETLDGMVFKCHLCEAAYHDRSGALSHLANVHATEYEQLVSKGALDGTSDKSENTDDDDRGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREETDDDEASPNTSDEKVNGYRFQDDDSGNEIPNNVNNNNSPPAAPYEKKLRLDMTSRKYSSEENEGENGSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661758;
90% Identity: iTF_01220151;
80% Identity: -