Samb074513.1
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- -
- Assembly
- GCA_963921215.1
- Location
- OY992523.1:27142316-27170137[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-13 4.5e-09 38.9 0.0 3 89 217 285 215 285 0.91
Sequence Information
- Coding Sequence
- ATGTCCTCTGCCGTCGTCAACGTGCCGCTCGACGAGGTGCTAGCCATCAACGACAAAGTGGTAGTCCGGGCCGAAGATCTCCTCAGCTGGGTGTGCGATGGAACCGGGTGGAGGTGGGGGCTACGCGCAGTATGGCGAGGCGCCTGCGCCCCGCCGCCGGACGCCAAGCCCACGGAGAACCTGCACCAGGCCAGGCTGGACTTCAGCGATGTGGAGAGGGAGAAGAGCGCTATAGTGAACAACTCCATCCCTGGCGTGGTAGTCTTCTCCTACCCTCGCTACTGCCGGTACCGCGCGTTACTCTCTCGCCTGGAGGGGGTGCAAGGGGACTGGCTGAGGGACTCGCTGGTGGCCGCGCTGGGGGGCTACGCCGCGCCTACTGACAACACGCGAATACTCTACTGCAAGGACACGTTCGAGTATCCCGAGCTGGAAGGCCACGAGTTCGTGTGCAACGAGCTAGCTCCCAAACTGAAGGGTAGAGGTCGCGGCCGCCGCCGAAGGGCGTCACCCGACGCCTCATCGCCTGACAGTGCGGATTCAGAGCCGATTGCGATGAGGGTACAAACACCCCGCCGTCTTTCCCTCCGGAACGGCACAGAGAAATCACCCGCCCTTGAAAAAGAGCCCCGCGACTCCAGCGAAGACCGCGCCTTCCTAGCGCGCCTGTGGCTGTTCCACCGCGCGCGCGGGCAGCCGCAGCCGCTCAAAGACCTGTCGCTGCGCTCGCTATACCTGCGCGTATCGTCGCGCGGCGGCTACGACGCGGTGTGCCGCCGCCGCCTGTGGCGGAACCTTGCGACGCAGCCCGAGCGGGCTAAGGCGCACTACGAGAGGTACCTCCTGCCGTTCGAGAAGCACGAGTCCCGCAACGGCTCGCGGCCCAACGGACGGCTGGATGAGCCGCGGACGGTGGCCACCATAGAGCTGCGCGACTCGCCGCACCGCGACGCGCCGCCCGATGATAGCCAAGAGGTGGACAGTGAAACCGGCGAAGTGAAAGAGGAGCTCAACCTAATCTCTAAACCAGCCGAGGAACTCAACCGCGAGTTCCTAGCCTCCCTCCCTAAAGAGGAGAAACCCCCTAAAATCACCCTCAAACCGGTGGAGGCGCTCATCGAGCCCGGCGGCGGGGGCAAGCTGCTTAAGGAGAGCAAAGATACTAAGGTGTTAGAAGAATCGGGCGCTGAGAGGCTGAGCGACGGCGGCTCCGTGCTAATGAACGAGCTCGCGAACACGCTCAACTTAGGAGTCCCCTCCCCCTACCTGCAAGAGTCCCGGCAGGAGCCTCCCGTCACCAACTCGCTGGCCAGCCTGTGCGGGCTCGGGGACAAGTACAACGGCCACGACAACGGCGATCAGAAGAGCAGCCGGCCGCTGGGCCGCAGCTCGCTGCGCGCGGTGCGAGTGAAGCCGGCGAGGGCCAGCAACCCCCCCGCCAGTACGCCCCCAGGGCTGGCGAGTACTACAGAGCCCCGCGCAAGTTCACTAAACAACTTCGGCATacaccgcccgccgccgccgcccgatGACGACCTCATCGAGGTGCCCTACAAGCCGAAAACGCCAGAGATCATAGACCTAGACGAATATCCGGAAAGTCCGCAGTCCGTCAAAAAGCAGAAACTAGACATCCTCAAAGAACGAGGCCTCGAAGTCACCGCCGTCCCCCCCTGGCCGTTACAGCCCATCGCTGGCCCCGTGCCCCCCTTAATCAACCCGCCCCCTATGCTGCTCAATCCAGCGATGCAACACCAAATTATGACACAAGCATCCTTATTTCAAATGTACAATATCATCCCCCCTTCTTACAACGGCGCCCAACCTCCCAGAGTTATTCAAGCGACCAGCATTTTCGGTTCCAGTGGACCCGAGAAAACGGTCTACGGGAACCCTAAGGACCCCTTCATGCCCCCTCCCCACGTTTTACATGGCACCCCAGTCAAACCGACCCGCACTGTACCCGCCTCGCCCCTCCCACAAGATATATTAGATTTGACTTGCAAATCGGATGTTTCTCCCAAACCAGCGGTGGAGATTGTCAGAGTCCCCACTACGTCATCACAGTCGCCATCGAAGCAAAACGCGCAGAATTTGAGTaagaattacaaattaatgGACGGCAAAGCGGTGGTAGGATCTAATTTGGAGATTACTTTAGTCAATCCAAGAGCGCAGACTCCTAATAAGAATAGGGCTCCGCAGAAAAGGTCTTCCAACGGCAAATTCATGTCGAGTAAGACCCCCACCCCCCCTAAGGAGGGGAGGGAGCTGCGCCCGTCGACTTCCCCGTCTGGCCCGAAGAGGAATCCCATTGTGGTGCCGAATTATCAGATCAATGCGAGGGATGACGTGTCGCCCACCAGTTCTACGGGCTCCCGCGATAGCCAAGGCGCCCAGCCCCTCCCGTCGGGCCCCGGCGGCCTGGGCGCCCTCGGCCTGGGCGGCCTAGGCCTCCTAGGGCTCCACAAGGGCGCAGACCCTGCATACATGAGTGCGCTGTACGGACTGGGGCAGCTCGACCCGCGACTAGCTGCGTACAGGGATGTGTTGGCGAGTCAGTTTAGAGGTTATTCGGGCTTGCTAAGTATGGGCGCGGCCACCGGCACTCCCACCACCAAGAACTGA
- Protein Sequence
- MSSAVVNVPLDEVLAINDKVVVRAEDLLSWVCDGTGWRWGLRAVWRGACAPPPDAKPTENLHQARLDFSDVEREKSAIVNNSIPGVVVFSYPRYCRYRALLSRLEGVQGDWLRDSLVAALGGYAAPTDNTRILYCKDTFEYPELEGHEFVCNELAPKLKGRGRGRRRRASPDASSPDSADSEPIAMRVQTPRRLSLRNGTEKSPALEKEPRDSSEDRAFLARLWLFHRARGQPQPLKDLSLRSLYLRVSSRGGYDAVCRRRLWRNLATQPERAKAHYERYLLPFEKHESRNGSRPNGRLDEPRTVATIELRDSPHRDAPPDDSQEVDSETGEVKEELNLISKPAEELNREFLASLPKEEKPPKITLKPVEALIEPGGGGKLLKESKDTKVLEESGAERLSDGGSVLMNELANTLNLGVPSPYLQESRQEPPVTNSLASLCGLGDKYNGHDNGDQKSSRPLGRSSLRAVRVKPARASNPPASTPPGLASTTEPRASSLNNFGIHRPPPPPDDDLIEVPYKPKTPEIIDLDEYPESPQSVKKQKLDILKERGLEVTAVPPWPLQPIAGPVPPLINPPPMLLNPAMQHQIMTQASLFQMYNIIPPSYNGAQPPRVIQATSIFGSSGPEKTVYGNPKDPFMPPPHVLHGTPVKPTRTVPASPLPQDILDLTCKSDVSPKPAVEIVRVPTTSSQSPSKQNAQNLSKNYKLMDGKAVVGSNLEITLVNPRAQTPNKNRAPQKRSSNGKFMSSKTPTPPKEGRELRPSTSPSGPKRNPIVVPNYQINARDDVSPTSSTGSRDSQGAQPLPSGPGGLGALGLGGLGLLGLHKGADPAYMSALYGLGQLDPRLAAYRDVLASQFRGYSGLLSMGAATGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00681452; iTF_00683110; iTF_00682155;
- 90% Identity
- -
- 80% Identity
- -