Basic Information

Gene Symbol
-
Assembly
GCA_949315975.1
Location
OX438854.1:7272853-7310097[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-14 1.2e-10 42.3 0.0 3 89 262 330 260 330 0.91

Sequence Information

Coding Sequence
ATGCTGCATCCCGTGCGGGATGAAGTGCTAGCGATCAACGACAAAGTGGTAGTCCGAGCCGAAGATCTCCTCAGTTGGGTGTGTGATGGCACCGGGTGGCGGTGGGGGCTTCGAGCCGTGTGGCGAGGCGCATGCGCCCCGCCGGCAGACCCCAGGCCTTCGGAGCCCTTGCACCAGGCCAGGCTTGACTTCAGCGATGTGGAGCGGGAGAAGAGTGCCATAGCGACGATGGTGGCAGTGGGTAATCCACAATGGAGACCTTTACCTTTCCTGTTTCTGCTGACGCTGATTGTCCCAGGGCCACCCTTCATCTACCCTGGCTTCAGCGACATGAAATGCGAGTTGAGCGTTTTAGTGAACAACTCGAACCCCGGCGTGGTCGTGTTCTCCTACCCCCGCTACTGTCGCTACCGAGCGCTGCTCTCTCGACTTGAGGGTGTGCAAGGCGACTGGCTGCGAGACTCGCTGGTAGCCGCGCTCGGGGGGTACGCTGCGCCCACGGACAACACGCGGATCCTCTACTGCAAGGACACGTTCGAGTACCCCGAGCTCGAGGGCCACGAGTTCGTGTGCAACGAGCTGGCGCCCAAGCTGAAGGGCCGGCCGCGGGGCCGCCGCCGCAGGGCCTCGCCCGACGCCTCCGCCTCCGCCTCCGCCTCCGCCTCCGCCGACACCGCGCCCGACTCCGAGCCCGACGCGCCCAGGGTGTCGACCCCCCGCCGCCTTTCCCTCCGCAACGGCACGGACAAGCTGGAGCAGGAGCCGCGGGACTCCAGCGAGGACCGCGCCTTCCTGGCGCGCCTAAGGTTGTTCCACCGCGCGCGCGGGCAGCCGCAGCCGCTCAAGGACCTGTCGCTACGATCGCTGTACGTGCGGGTGGCGTCCCGCGGCGGCTACGACGCCGTCTGCCGCCGGCGGCTATGGCGCAACCTCGCCTCGCAACCCTCGCGGGCGCGAGCGCACTACGAAAGATACCTTCTGCCGTTCGAGAAGCACGAAACCCGTAACGGCACGCGCCTCCCCAACGGACGGCTGGAGGAGCCGCGGACCGTCGCCACCATAGAGCTGCGAGACTCGCCGCACCGGGAGAGTCGGCCTTCAACACCCACCCACGGGAACCACGAGATCGACAACGAAACTGGCGAGGTCAAAGAAGAGTTGAACCTAGTCTCCAAGCCGGCTGAAGAGTTGAACAGAGAGTTCCTAGACTCCCTACCTAAAGAGGAAAAATCAGAGAAACCCTTAAAAATCACTCTCAAACCGGTCGAGAAGCTTATAGAGTCGAACAGTATGAAGAAGCTGTATAAGGAGAACAGCTCGCTGACGACCGAGCTGGTGGTGAAGCAACAACTCAAAGAGTCTGGGGGGAGGTTCGAGGGGGAGAGGTTGGGGGATGGAGCCGTGCTGATGAGTGAACTGGCGCACACTCTAAGTCTTGGCCCCGACTCGTACCTGAAGGAATCGCACCGGTCGCAGCACGATCTCTCGGCCACCAACTCGCTGGCCGGCATGCGGAGCCTCGGGGACAAGTACAACGGCCACGATGGCAACGACCAGAAGAGCAGTCGTCCCGCGGGCCGCAGTTCCCTCCGCGCGGTGCGGGTTAAGCCAGCGCGGGCCAGCAACCCCCCCGCCAGCACTCGTAAATTGTTAATTCCAACCACACCGGTCATAACATATATACAGGGTGTGTCTAAAATGTCAACACTCGTGTCCCCCGTAGCCCCCGGCGCGGGTTCGGAGCCCCGTTCGAGCGCGCTGAACAACTTCGGCAtccaccgcccgccgccgccgcccgacgACGACCTCATCGAGGTACCATACAAGCCGAAAACACCGGAAATCATAGATTTGGACGAGTACCCAGAAAGTCCGCAGTCCGTCAAAAAGCAAAAACTAGACATACTCAAAGAACGGGGCCTCGAGGTCACCGCCGTCCCCCCCTGGCCCCTGCCCCCCGCCCCTCCCCTCCTCAACCCCCCCATGATCCTAAACCCGGCCATGCAACACCAAATCATGACTCAAGCGTCCCTATTCCAAATGTATAACATCATCCCCCCAAACTATAACGGCGCTCAGCCCCCAAGAGTGATACAAGCCACCAGCATATTCGGTTCCACCGGCCCCGAGAAAACCGTCTACGGGAACCCTAAGGACCCCTTCATGCCCCCTCCACACGTGTTACATGGAACCCCAGTTAAACCCACCAGAACAGTGCCGGCAACTTTACCACAAGACATATTAGACTTGACATGTAAACTAGACAGCTCCCCCAAACCGGCAGTGGAGATAGTGAGGGTGCCTACCACGCCATCTCCTTCCAAAGCTAACGCCCAAAATCtaagtaaaaattacaaattggtAGATGGAAAAGCGGTGGTAGGGTCCAATTTGGAGATAACGCTAGTGAATCCGAGGGCGCAGACCCCGAATAAAAATAGAGCTCCACAGAAGCGGTCTTCGAACGGCAAGTTTATGTCCAGTAAGACGCCGACGCCGCCTAAGGAAAGTAGGGCGCAGACTTCCCCTTGCGGCCCCAAGAGGAACCCTATTGTGGTGCCCAACTATCAGATCAATGCACGGGACGATGTGTCGCCTACCAGCTCTACGgGGTCCCGCGACAGCCAAGGCACCCAGCCTACCGCGGCCCCCGGCCTGGGCGTGGGCGGGCTGGGCGCTCTGGGCGGGCTGGGCGCGCTGGGCGGGCTGGGCCTGCTGGGCTTGCACAAGGGCGCCGACCCCGCCTACGTGAGCGCCTTGTACGGGCTGGGCCAGCTCGACCCGCGGCTGGCCGCCTATAGGGATGTACTGGCGAGCCAGTTTAGAGGTTACTCGGGCCTGTTAAGCATGGGCGCGGCCACCGGTACCCCCACCACCAAGAACTGA
Protein Sequence
MLHPVRDEVLAINDKVVVRAEDLLSWVCDGTGWRWGLRAVWRGACAPPADPRPSEPLHQARLDFSDVEREKSAIATMVAVGNPQWRPLPFLFLLTLIVPGPPFIYPGFSDMKCELSVLVNNSNPGVVVFSYPRYCRYRALLSRLEGVQGDWLRDSLVAALGGYAAPTDNTRILYCKDTFEYPELEGHEFVCNELAPKLKGRPRGRRRRASPDASASASASASADTAPDSEPDAPRVSTPRRLSLRNGTDKLEQEPRDSSEDRAFLARLRLFHRARGQPQPLKDLSLRSLYVRVASRGGYDAVCRRRLWRNLASQPSRARAHYERYLLPFEKHETRNGTRLPNGRLEEPRTVATIELRDSPHRESRPSTPTHGNHEIDNETGEVKEELNLVSKPAEELNREFLDSLPKEEKSEKPLKITLKPVEKLIESNSMKKLYKENSSLTTELVVKQQLKESGGRFEGERLGDGAVLMSELAHTLSLGPDSYLKESHRSQHDLSATNSLAGMRSLGDKYNGHDGNDQKSSRPAGRSSLRAVRVKPARASNPPASTRKLLIPTTPVITYIQGVSKMSTLVSPVAPGAGSEPRSSALNNFGIHRPPPPPDDDLIEVPYKPKTPEIIDLDEYPESPQSVKKQKLDILKERGLEVTAVPPWPLPPAPPLLNPPMILNPAMQHQIMTQASLFQMYNIIPPNYNGAQPPRVIQATSIFGSTGPEKTVYGNPKDPFMPPPHVLHGTPVKPTRTVPATLPQDILDLTCKLDSSPKPAVEIVRVPTTPSPSKANAQNLSKNYKLVDGKAVVGSNLEITLVNPRAQTPNKNRAPQKRSSNGKFMSSKTPTPPKESRAQTSPCGPKRNPIVVPNYQINARDDVSPTSSTGSRDSQGTQPTAAPGLGVGGLGALGGLGALGGLGLLGLHKGADPAYVSALYGLGQLDPRLAAYRDVLASQFRGYSGLLSMGAATGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01334541;
90% Identity
-
80% Identity
-