Samb008647.1
Basic Information
- Insect
- Scoparia ambigualis
- Gene Symbol
- dl
- Assembly
- GCA_963921215.1
- Location
- OY992502.1:36973575-36986515[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-63 2.5e-58 199.1 0.4 13 169 41 201 37 201 0.95 2 2 0.2 6.1e+03 -0.7 0.0 62 74 348 360 345 381 0.78
Sequence Information
- Coding Sequence
- ATGGATAGGACATGTCAGTTTAACACCATTCTCCCTCAACAAAAGCGCGAACGCGACTTGCACGGCAACCTCTTGTCTGGTAGTACGGAAATCGGCTATCTCAATATTCACGGTACGAGACGGTTCCGATATGAGTGCGAGGGGCGGTCAGCGGGCTCGATTCCCGGCGTGAACAGCACGCCGGAGAACAAGAGCTTCCCGGCCATCAAGGTGTGCGGCTACAAGGGCTGCATGATCATCGTCGTGTCCTGCGTCACTAAGGATGAACCTTACAAACCGCACCCTCACAACCTGGTGGGGCGCGACTGCCAGATGGGCGTGTGCACCGTCAAGGTGAAGACCGACGGCGACGCGGACCACTGCCAGGTGCACTTCAAGAACCTCGGCATCCAGTGCGTCAAGCGGCGCGACATCGCGGAGGCGCTGCGCGTCAGGCAGGACCTGCGCGTCAACCCCTTCAAGACCGGGTACGCGCACAAGAGCAACCCCCAGAGCATAGACTTGAACGCGGTGCGGCTTTGCTTCCAAGTGTTCCTGACGGACGACTCGTACAAGGTGCAGTGCGCGCTGCAGCCGGTGGTGTCCGAGGTGGTGTACGACAAGAAGGCCATGTCGGAGCTGCTCATAGTGCGCTCCAGCCACGTGTCAGGCCCTGTTCGTGGCGGCACCACTGTCATACTGCTGTGCGAGAAGGTGACGCGCGAAGACACCGAGGTGCTGTTCTACCGCGAGGACGCGAGCGGCGCCACGGTGTGGAGCGAGCGCGTGCCGCCCGAGTACGTGCACAAGCAGCTCGCCGTCGTGTTCAAGACGCCGCCCTACCACGACCAGGCCACCGCGCACCACGTCACGGTGCAGTTCCGGCTGTACCGCGTGTCCGACAACGCCAAGAGCAACGTGTTCAACTTCGAGTACATCCCCGAGGGCCAAGGTACCCGCGCCCCCCGCCGCCCCCTGCCCGAcctggccgcgctggccgcgctgcTCCCCCGCCCCGACACCAACAACAACCACGCCCGCAAGCACGAGCCCGCGCTCCCCCCCACGCCCCCCCACGCGCACGACCTCGTCTCCTCCACCAGCGACTCCCTCTCCCCCGACGACAGCGCCTCCGTCACCATAGACCTGAACGGCAACGCCGACGTCGACATGCCCGACTCCAACGAGAAAAGCTTGAACGAGCTGCTCGACCAGGTCGCGGAGCTCGACGAAATCTACACCGAGAACCGCACGCGCCTCGAAAACATCACCAGCTTGGCCGACGAGCCCGACGCGGAGGACTTCAACGACGCCGGCACTTACACCAGCCTCCAGCTCGCGTTCAGGAACCCGGTGCTGATCGCGGAGCCCGAGCCGGAGGAGGCGCCGCCGGTGAGCTACCGCGGGCCCATCATCGAGTTCGCGCCGCTCAAGCGCGACTCGGCCgagcgcgcgccgccgctgccgcccaAGCGCGTGCGCAAGATCTCCGCCGCCGAGCCGTTCAAGAGCAGCCAGACTTCCGTAGACAGCATCCTGAAGCCGGGCCGGCAGCTGCCCCTCACCAGGAACCCCGAGCTCCTGGTCACCAAATCGGAGATGACCGTCGCGCGGAGCGAGCCCGCCCTGCCGCCGGCTAAGAAGCGATCTTTCTTCTCCCGCCTCTTCAGGAGGAAGGACAAATCGCCCGCGCCCAGCGTTAAGTCCGAGGGTCGCAAGGAGAAGAAGTGTAAGCCGGCCGGGCGCTCCGTTAGCAGCGTGTCGGGGCAGCGGCCGGCGCGCTTCAAGGCGTCGCAGTCGCAGGCCTCGCTCAAGGACTCGGCCTCGGGCGCCGGCCTCAGCTACGCCGACAGCATCACGCACATATCGCTGCACGCCAGCGACACGGACAAATCGGCCTCGCAGCCTTGCTTAGGCTCCATGGGCGCCGACGTGCCCGAGGGGACCATCCTCGTGGCCGAGAGCGTGCTGGCGCTGGACGCGACGGCGTTCCGCAAGCTGCAGGACGAGCTGGAGCTCACGGACGCGGAGCACTACGCGCTGTACATGGCCGTGGCGCCGCACGCTACAGTGTCGGAGTTCGACGACACCAGCTGCTACTACTCGCCCATCGACGCCAGCAAATTTCATAATTGA
- Protein Sequence
- MDRTCQFNTILPQQKRERDLHGNLLSGSTEIGYLNIHGTRRFRYECEGRSAGSIPGVNSTPENKSFPAIKVCGYKGCMIIVVSCVTKDEPYKPHPHNLVGRDCQMGVCTVKVKTDGDADHCQVHFKNLGIQCVKRRDIAEALRVRQDLRVNPFKTGYAHKSNPQSIDLNAVRLCFQVFLTDDSYKVQCALQPVVSEVVYDKKAMSELLIVRSSHVSGPVRGGTTVILLCEKVTREDTEVLFYREDASGATVWSERVPPEYVHKQLAVVFKTPPYHDQATAHHVTVQFRLYRVSDNAKSNVFNFEYIPEGQGTRAPRRPLPDLAALAALLPRPDTNNNHARKHEPALPPTPPHAHDLVSSTSDSLSPDDSASVTIDLNGNADVDMPDSNEKSLNELLDQVAELDEIYTENRTRLENITSLADEPDAEDFNDAGTYTSLQLAFRNPVLIAEPEPEEAPPVSYRGPIIEFAPLKRDSAERAPPLPPKRVRKISAAEPFKSSQTSVDSILKPGRQLPLTRNPELLVTKSEMTVARSEPALPPAKKRSFFSRLFRRKDKSPAPSVKSEGRKEKKCKPAGRSVSSVSGQRPARFKASQSQASLKDSASGAGLSYADSITHISLHASDTDKSASQPCLGSMGADVPEGTILVAESVLALDATAFRKLQDELELTDAEHYALYMAVAPHATVSEFDDTSCYYSPIDASKFHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00683095;
- 90% Identity
- -
- 80% Identity
- -