Sinc035558.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- dsx
- Assembly
- GCA_036419045.1
- Location
- CM071643.1:15920300-15920884[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-24 4.1e-20 72.8 11.8 2 47 33 78 32 78 0.97 2 2 0.45 5.7e+03 -1.3 0.1 19 27 180 188 175 189 0.80
Sequence Information
- Coding Sequence
- ATGGTGTCCGTGGGCGCGTCGTGGCGGCGTCGCACTCCCGACGACTGCGAGGAGCGCTCAGAGCCTGGTGCCTCCAGCTCGGCGGTGCCGCGCGCGCCGCCCAACTGCGCCCGCTGCCGTAACCACCGCCTGAAGGTCGAGCTGAAGGGACATAAGCGGTACTGCAAGTACCGCTATTGCACCTGTGAAAAGTGCCGCCTGACGGCCGACCGCCAGCGCGTGATGGCGCTGCAGACCGCGCTGCGCCGTGCCCAGGCGCAGGACGAAGCCAGAGCGCGAGCTGGCTTGCAAATGACCGGAGTGGAACTAGAGAGGCCCGAACCGCCCATTGTGAAAGCTCCGAGGAGTCCTGTAAttccaccaccaccaccgcgCTCCCTCGGCTCGGCTAGCTGCGACTCTATCCCGGGATCGCCCGGGGTCTCTCCGTACGCTCCACCGCCGCAGCCACCGTCAGCGCCGCCACCGCCGAACATGCCGCCGCTGCTGCCTCCTCAGCAACCTGGTAAGTCGTTAGTCTATTTATATTGCTTATCAATGCATGCTGTTCGCTGTCCTTATTCATTCACTTTGAATATTTCGTAG
- Protein Sequence
- MVSVGASWRRRTPDDCEERSEPGASSSAVPRAPPNCARCRNHRLKVELKGHKRYCKYRYCTCEKCRLTADRQRVMALQTALRRAQAQDEARARAGLQMTGVELERPEPPIVKAPRSPVIPPPPPRSLGSASCDSIPGSPGVSPYAPPPQPPSAPPPPNMPPLLPPQQPGKSLVYLYCLSMHAVRCPYSFTLNIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01317340;
- 90% Identity
- iTF_01071676;
- 80% Identity
- -