Sinc029028.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- dmd-4
- Assembly
- GCA_036419045.1
- Location
- CM071639.1:12979446-12988860[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-24 1.3e-20 74.5 11.2 1 47 7 53 7 53 0.98 2 2 1.1 1.4e+04 -2.5 4.4 2 11 282 291 281 292 0.86
Sequence Information
- Coding Sequence
- ATGATCGGAGGTAGAGCGCGCGTTCCGAAGTGCGCGCGCTGCCGTAACCATGGTCTCATCTCTAGCTTACGAGGGCACAAGAAGGCCTGCGCTTACCGACATTGCCAATGCCCAAAGTGTGGTTTGATCAAAGAACGCCAGAGGATTATGGCAGCGCAGgTGGCACTAAAAAGGCAGCAAGCTGCTGAAGATAAGATCGCATTACATCTGGCGTCGGTGGAGAGCGGAACTCCGTTGGAGTCTCTTCCGCCGGGCCGCATCTACGGTATGCGGGTCACGCAGCCGTGCCCGAGCCCCGGGCCTGAACCCGACTCTGCAGCCGATGACCAAACTCCAATCCACATCGACAGCGAGACTAGTGACTCTACACCGGACTGCGGAAGTGCTTCTCCAGATTCAGCCGCAAATGCTGCCGGAACCAGAGCTCGTGAAGATGCGGACGGAGAAGGTTCCGTCAGCTCTGCTGGTCTCGAGATGCTTCGGAAGCTCTTCCCTGGCAAGAAGCGGTCGGTCCTCGAGCTGGTGCTGCGTCGGTGCAACCATGACCTGCTGCGAGCCGTTGAACATTTCAATGCTACACATGCGTCTCAAGAGAAGCCGACAGCGAGTAGTTCAGGCAGTGGTGGCTTTGAAATGTCAGTATCCAGTTCAGAGGAAGCGGAGTCCCGGTGGTCGGCGTTCCGGCCAGTGGGGCCGCGGGCGCCGCTGCTGCCTGCTTTGGTCATGGGTCGTGTCTGTGGATCGGACTGGCTGGTACCTTTACCAGCTCTGCCAGCACTTTCAACTCCTTTACTTTTACCCCTACAACACCCCCATCAAGCTCCCGCCCCTTGTAATCCTTGCTCTCCAGACTGCAGGCAGTGCAATATACATCATTAA
- Protein Sequence
- MIGGRARVPKCARCRNHGLISSLRGHKKACAYRHCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTPLESLPPGRIYGMRVTQPCPSPGPEPDSAADDQTPIHIDSETSDSTPDCGSASPDSAANAAGTRAREDADGEGSVSSAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHFNATHASQEKPTASSSGSGGFEMSVSSSEEAESRWSAFRPVGPRAPLLPALVMGRVCGSDWLVPLPALPALSTPLLLPLQHPHQAPAPCNPCSPDCRQCNIHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01503021;
- 90% Identity
- iTF_01331626;
- 80% Identity
- -