Sinc020634.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- CSRNP3
- Assembly
- GCA_036419045.1
- Location
- CM071634.1:13851627-13853855[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.14 7.1e+03 -1.9 3.5 85 106 34 55 9 104 0.54 2 3 2.9e-103 1.5e-98 330.5 8.0 2 217 213 419 212 420 0.93 3 3 0.23 1.2e+04 -2.6 2.3 44 44 612 612 545 693 0.52
Sequence Information
- Coding Sequence
- ATGGACAACTCCGATCAAGGCGTGTGCCCCAATGAGGAAGACATAAAGAACACTTGTGAAATCTCGTCAAATGTACAAGAAGAAAATGCAGTGCAAGAGTCTATCATAAAAGACGAAAAAAACAGTGACAGTGATGTTAACAGTGATGATTTGGACTCTAATGAGGATCACAGTAATGTAAATAGTAATATTAGTTCTCAGTTTTATGAGAGCAgtgatagtaaaataaattatgccgTAAAAATAGACGATAGTGATACATTAAGCGATATTGAAGATATTAAAACAGATACAGCATCGGCGGACAGTGAAGATTCAGCGCTTGGAAGCCTTCCTCCAGATGCCGCGCCCAACGACAGGGAAGAAGAAGGGCAAGACCGATCAGATGGTAGTGACTCTGGCCTTGGGTCGGAAACTAACGAAGATTCAAAAGCACTAGCTTTTAATCTTACCTTGCCTTGTGCAAGTGATGTCAATAACCAGAATAAACCTGGATCAATCGATCAAGCAGAAAAAACTAAAGATGAAAATATTGAACTGAATAACAAAaacttactaataataaattctcCAACAAGAAGTAATcttaaaagaaaactaaatgacGAAAATGAAAATGAACCCACATGCAAACGAAGGAAACAAAGCATTAAGTTCGATAGTGTTACTGTGTTCTATTTTCCAAGAGCTCAAGGCTTTACGTGTGTACCATCTCAAGGTGGATCCACATTAGGAATGGAGTGGGAACATACGCACGTCCAAAAGTTCACATTAGCAGAACACGCTTTAGAACAAAGAAGATTACATAGACAGATATTGCAACAGCTAAAAAGTGAACGTCACTTACAAGGCACTTCCCTATCTTCCAGTGAAGATAGCGACACCGAAGAAGAAGCGAGTGATATTTCTGAATCAGAACTTGATTTagatagttattattttttgcaaccAATACCAACCAGGCAAAGAAGAGCATTACTTCGCACAGCGGGTGTAAGAAAAATTGAAGCTTATGAAAAAGACGAATGTCGGGATATACGAACATCAAGAGAATTTTGCGGATGCGCTTGCAAAGGAGCCTGCAATCCAGAAAGCTGTTCATGTAGTATGGCAGGAATAAAATGCCAGGTGGATAGGTTGAATTTTCCTTGTGGTTGTACTAGAGATGGATGTGGAAATACTACAGGGCGTATAGAATTTAACCCTGTAAGAGTACGAACGCACTTTATTCACACACTCATGAGGATAGGACTTGAAAGGAAGAATGAAGTAAACCAAGACTTAGCCAGGAGACAATGGCCAGACGCCCACGTTACTGCTCCGTGTGTAACAAATGCTTCATTTGAAAGAGATCGTTGTATTAATCACGAGGATGGGTTGCTACGGGACATTAATTTAAGCCCACGAATAGAAGTGGAATCTTGCGTTAACGTcggaaattttaataatattcattgtGATTTGACTACTGGAGCTCATCCCACAAATGTGCAAGGTGATTTAACATATGGTTATACAAACGAAGCAGGATCTTCTAGAAATATGAATGAAAACACCATACGCTATGATAACATTAACACTCATCACAACCACACTAATCCTTATACATCTAATATACTTCAGGGAAAAGGGCCGCCTTATTCTGCAACAAATACAATGGGCTACAACACAATGACAAATAATATGCAACGTTTTCCATGCGATCTCAATTACACATATGAACAAGCACAACATTCAGAAAATCATCACTTTAAAAGTCTGCAAAGTTTTTCTGCGACAAGTTTCGAAGAATTTGCACACAGCTCTCAAATAACCATGTTCAACCAATATGGTCACATGTATGTTCCcgaatacacacaaaaacagaataataatatgaatgagCATGCACTACAATATCACAATATACAACAAAATCAATACGGAGCTTTCAAAACGCCGTCAGGATGCATTAATAATCCCCAAGATAAAAGTGAATCACAGTACACCACGTTGATGACATTGCCATATCAAAATAGCACTAAGTTCGAGTCTGTGGATAATGATGAAAATTGGTTCAGTCATAACACGCTGATGACTTTGGACAGTGCCGATCAAGCCACTCAAGATGCTTCCGAACTGTCGGCACAGCCTAGTGAGAATACGGTATCAGAGAGCAATGCTCCTGAAACCACGGAAAACTTTGGAGAGCTAATTAAGAAAACTATGGTAGAATCTGTTACTGTGTAG
- Protein Sequence
- MDNSDQGVCPNEEDIKNTCEISSNVQEENAVQESIIKDEKNSDSDVNSDDLDSNEDHSNVNSNISSQFYESSDSKINYAVKIDDSDTLSDIEDIKTDTASADSEDSALGSLPPDAAPNDREEEGQDRSDGSDSGLGSETNEDSKALAFNLTLPCASDVNNQNKPGSIDQAEKTKDENIELNNKNLLIINSPTRSNLKRKLNDENENEPTCKRRKQSIKFDSVTVFYFPRAQGFTCVPSQGGSTLGMEWEHTHVQKFTLAEHALEQRRLHRQILQQLKSERHLQGTSLSSSEDSDTEEEASDISESELDLDSYYFLQPIPTRQRRALLRTAGVRKIEAYEKDECRDIRTSREFCGCACKGACNPESCSCSMAGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPVRVRTHFIHTLMRIGLERKNEVNQDLARRQWPDAHVTAPCVTNASFERDRCINHEDGLLRDINLSPRIEVESCVNVGNFNNIHCDLTTGAHPTNVQGDLTYGYTNEAGSSRNMNENTIRYDNINTHHNHTNPYTSNILQGKGPPYSATNTMGYNTMTNNMQRFPCDLNYTYEQAQHSENHHFKSLQSFSATSFEEFAHSSQITMFNQYGHMYVPEYTQKQNNNMNEHALQYHNIQQNQYGAFKTPSGCINNPQDKSESQYTTLMTLPYQNSTKFESVDNDENWFSHNTLMTLDSADQATQDASELSAQPSENTVSESNAPETTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01331590;
- 90% Identity
- -
- 80% Identity
- -