Sgig030750.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963935595.1
- Location
- OZ012546.1:33821197-33823440[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.19 1.6e+04 -2.3 4.5 88 110 32 53 5 107 0.49 2 4 0.49 4e+04 -3.6 0.1 91 118 164 192 155 199 0.56 3 4 2.3e-102 1.9e-97 327.6 8.3 2 218 214 421 213 421 0.93 4 4 0.17 1.4e+04 -2.1 1.7 40 63 622 645 553 698 0.58
Sequence Information
- Coding Sequence
- ATGGAGAATCCAGCCACAGACCAGGGCGTGTGCCCTAAGGAGGAAAATACAAATACCGATTGTGAAAACACATTAAATGTGCAAGAGGACAATGCAGAGCAAGAGTCTGTGATAAAAGACGAAAAAAACAGTGACAGTGATGCTAACAGTGATGATTTGTACTCTAATGAGGATCAAAGTAATGTAAATAGTAATATTAATTCTCAGTTTTATGAGAGCAGTGATAGTAAAATAGATTTTGCCGTAAAAATAGAGGATAGTGACACATTAAGTGACATTGAAGATATAAAAACGGACACAGCTTCAGCGGACAGTGAAGATTCAGCTCTTGGAAGCCTTCCTTCAGATGCAGCGCCTAACGACAGGGAAGAAGAAGGCCAAGACCGGTCAGATGGAAGTGACTCTGGTCTTGGGTCGGAATCTAACGAAGATTCAAAAGCTCCTGCATTTAATCTTTTAATACCATGTGCAAGTAACGCCAATAACCAAAAACCTGAATTACCAGAAGCAAGTGAAAAAAATAACGACgaaaataatgaaatgaaaGACAGaagcttattaaaaaatatatctccAGCAAGgagtaatttgaaaagaaaactaaatgatgaaaatgaaaatgagcCGACGTGCAAACGAAGAAAAGAGAGCATTAAGTTCGATAGCGTTACTGTGTTCTATTTTCCTAGAGCTCAAGGCTTTACGTGTGTGCCGTCTCAAGGTGGATCCACCTTGGGAATGGAATGGGAACATACGCATATTCAAAAGTTCACATTGGCAGAACACGCTTTAGAACAAAGAAGATTACATAGGCAAATATTACAACAGCTAAAAAGTGAACGTCATTTGCAAGGCGCATCCCTGTCTTCTAGCGAAGATAGTGACACCGAGGAAGAAGCAAGTGATATTTCGGAATCGGAACTTGAATTAGATAGTTACTATTTCTTGCAACCAATACCAACAAGACAAAGAAGAGCATTACTTCGCACAGCAGGTGTTAGAAAAATAGAAGCTTATGAAAAAGACGAATGTCGAGATATACGCACATCTAGAGAATTTTGCGGCTGTTCTTGCAAAGGAACCTGTAACCCGGAAAGCTGTTCATGTAGTATGGCGGGAATTAAATGTCAGGTTGATAGGCTGAACTTCCCTTGTGGCTGCACCAGAGAAGGATGTGGAAACACTACAGGGCGCATTGAATTTAATCCTGTAAGAGTGCGAACACACTTCATTCATACACTCATGAGAGTAGGTCTTGAAAAGAAGAATGAAGAGAATCAAGAAGCGGCTAGAAGACAATGGGCAGACGCCCATAATATTACCACTCCTTCGTGTGTAACGAATACTTCGTATGAACAAGACCGTTGCATTACTCACGAGGACGGGCTGCTACGTGACGTCAACTTAAGCCCAAGAATCGAAGTGGAATCTTGTGTTAATGTCGGAAATTTCAATAATGTTCATTGTGATCTGAATACCACAGCTCATACCCCCAGTATGCAAGGAGATATGTCTTATGGTTATCGAAACGACGCAGGAACCTCCAGAAACATGAATGAAAGCACTATATGCTACGATAATATTAACAATCATCACAATCACACTAATCCCTATACATCCAATATACTTCAAGGAAAGGGACCGCCCTATTCTGCGGCTAATACAATGGGTTACAGCACAATGACAAACAATATGCAACGTTTCCCATGCGATCTCAATTACACATATGAACACGCACAACATTCGGAAAGCCATCGCTTCAAAGGCCTACAAAGCTTCTCTGCCACAAGTTTCGAAGAATTCGCGCACAACTCTCAAATAAACATGTTCAACCAATACGGCCACATGTATGTTCCCGAGTACACACATAAACAGAACAACAATTTGAATGAGCACTCACTACAATATCACAATCACAATATACAACAAAACCAATATGAAGCGTACAAAACACCATCGGGATGTGTTATTAATCCTGAAGATAAAAGTGACTCACAGTATACAACGCTGATGACATTGCCATATCAAAATAGCACTAAGTTGGAATCTTTAGATAATGATGAAAATTGGTTTAGTCAGAACACGTTGATGACTTTGGATAATGCTGACCACGCCACCCAAGATGCTTCGGAACTGTCGGCCCAGCCTAGTAAGGACACGGCGACAGAAAGCAATGCTTCTGAAACCACGGAAAATTTCGGAGAACTAATTAAGAAAACTATGGTAGAGTCTGTTACTGTGTAG
- Protein Sequence
- MENPATDQGVCPKEENTNTDCENTLNVQEDNAEQESVIKDEKNSDSDANSDDLYSNEDQSNVNSNINSQFYESSDSKIDFAVKIEDSDTLSDIEDIKTDTASADSEDSALGSLPSDAAPNDREEEGQDRSDGSDSGLGSESNEDSKAPAFNLLIPCASNANNQKPELPEASEKNNDENNEMKDRSLLKNISPARSNLKRKLNDENENEPTCKRRKESIKFDSVTVFYFPRAQGFTCVPSQGGSTLGMEWEHTHIQKFTLAEHALEQRRLHRQILQQLKSERHLQGASLSSSEDSDTEEEASDISESELELDSYYFLQPIPTRQRRALLRTAGVRKIEAYEKDECRDIRTSREFCGCSCKGTCNPESCSCSMAGIKCQVDRLNFPCGCTREGCGNTTGRIEFNPVRVRTHFIHTLMRVGLEKKNEENQEAARRQWADAHNITTPSCVTNTSYEQDRCITHEDGLLRDVNLSPRIEVESCVNVGNFNNVHCDLNTTAHTPSMQGDMSYGYRNDAGTSRNMNESTICYDNINNHHNHTNPYTSNILQGKGPPYSAANTMGYSTMTNNMQRFPCDLNYTYEHAQHSESHRFKGLQSFSATSFEEFAHNSQINMFNQYGHMYVPEYTHKQNNNLNEHSLQYHNHNIQQNQYEAYKTPSGCVINPEDKSDSQYTTLMTLPYQNSTKLESLDNDENWFSQNTLMTLDNADHATQDASELSAQPSKDTATESNASETTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01333837;
- 90% Identity
- -
- 80% Identity
- -