Sinc036953.3
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- rcor2
- Assembly
- GCA_036419045.1
- Location
- CM071644.1:18809884-18825787[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-10 2.8e-06 28.8 0.0 3 46 132 175 130 175 0.97 2 2 1.9e-11 5.6e-08 34.2 0.0 3 46 393 436 391 436 0.97
Sequence Information
- Coding Sequence
- ATGGTTCTTGCGGAAAGAAGTAATGATGTTCGAAACGGGAAGCGGTCAAGGGGGCCAAGCCCCAATGGTCATGGAAGTCCTGACTCCAGTTCAGAAGATGAAAATGTAGTACCATTTCCAGCCGAGAAGATAAGAGTGGGTAGAGATTATCAAGCAGTGTGTCCTGAGCTAGAACCTGTTGATCAAAGGAAGCCAGAGTTGATATCAGATCGTGCACTTCTAGTGTGGTCTCCTACTTATGATATAACAGATgcaaaattgGATGAATATATCACAATAGCCAAAGAAAAATATGGGTACAATGGTGAACAAGCACTTGGAATGTTATTTTGGCATAAACATGATTTGACTCGTGCATCACTGGACTTGGCAAACTTCACACCATTTCCTGATGAGTGGACTGTTGAAGACAAAGTTTTGTTTGAACAAGCTTTCCAATTTCATGGTAAAAGCTTTCATAGAATACGACAAATGTTACCAGACAAATCAATAGCATCTTTGGTCAAATATTACTATTCATGGAAAAAGACTAGAGCACGAACATCTTTAATGGATGTGGTTAGTGAGGGCCGCAATGCAACAGGCTCTGGTACAGGAAAGTCTGGCTCAGAACAAGGTGGCTCAGACAAAGAATCTGACAACGATGAGAAGAAGTGGACTATCCACCGAGGTATTGTGCGCGGcggggcgggcgcggcgcgcggcgctcCGTCGGCCGCTGCACAGGGCGAGGGCGGCGGCGAGAACGCGGGCAAGTGGTGTACCGTGTGCGGCATTCTGTGCTCCCACACCACGGCGCACAACTCCCACAAGTTGTGCCAGGCATGCCTCGTGCACGCCAGGCGCACGGGGTCGATGCGGCCCCTGTGCGGGCCGGCGGGGCGGCGCGGGCCCGGCAAGCCGGCGCGCTACAAGCACCGGCTGCCGCGCGGCATCTACATCAACCACGACGACCTGGTTGCCATGGCGACGCCGCCCGAGCCTTGCGAGCCGCCGCCCGCGCCTCAGCTGCCCAGCCTCGGCGACCTCATGCTCACCGTCATGGACAGGGAGATCGTGTCGCTCAAGAGACAAGTACAACAAAATAAGCAACAACTCAGTGCTCTTAAAAGGAAAGTAGGTGACAGTAGTGTGGAAGATCTTAGGCCCGGGGAACCACCAGCAAAAATTAATTCACGTTGGACAAATGAGGAATTATTGATGGCAGTGACTGGTGTCAGAAAATTTGGCAAAGATTTCCAAGCAATCGCTGAGACGTTGGGCACAAAGACAGAGGCGCACGTTCGTTCGTTCTTCGTTTCGTATCGTCGGCGCTATAACTTGGACGCTGTTTTACGCGAACACGAGGCGGACCGCGGCACACACCACATACAAGCTGgaACAACAAGTAGTACTGAAGGGGTTGAAAGCTCGACTGAAACCACCAACAACGGCACCGCCTCGCCACAAACTGCGAAAGATGAAAAGACGGAGGTGGACAGTGAAGGTGTATCTCTGGGGGCGCCCGCGGAGCAGGGCGGGCCCCCCACCACGCCCCCCAAGCAGAAGGGCAAGTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFPAEKIRVGRDYQAVCPELEPVDQRKPELISDRALLVWSPTYDITDAKLDEYITIAKEKYGYNGEQALGMLFWHKHDLTRASLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNATGSGTGKSGSEQGGSDKESDNDEKKWTIHRGIVRGGAGAARGAPSAAAQGEGGGENAGKWCTVCGILCSHTTAHNSHKLCQACLVHARRTGSMRPLCGPAGRRGPGKPARYKHRLPRGIYINHDDLVAMATPPEPCEPPPAPQLPSLGDLMLTVMDREIVSLKRQVQQNKQQLSALKRKVGDSSVEDLRPGEPPAKINSRWTNEELLMAVTGVRKFGKDFQAIAETLGTKTEAHVRSFFVSYRRRYNLDAVLREHEADRGTHHIQAGTTSSTEGVESSTETTNNGTASPQTAKDEKTEVDSEGVSLGAPAEQGGPPTTPPKQKGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_01331445;
- 80% Identity
- -