Sgig057084.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- RCOR3
- Assembly
- GCA_963935595.1
- Location
- OZ012556.1:5895243-5908723[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-10 4.5e-06 28.8 0.0 3 46 132 175 130 175 0.97 2 2 3.3e-11 1.5e-07 33.5 0.0 3 46 393 436 391 436 0.97
Sequence Information
- Coding Sequence
- ATGGTTCTTGCTGAGAGAAGTAGTGATGTTCGAAACGGGAAGCGGTCAAGGGGGCCAAGCCCCAATGGTCATGGAAGCCCTGACTCCAGTTCAGAAGATGAAAACGTAGTGCCATTTGCAGCTGAGAAGATAAGAGTGGGTAGAGATTATCAAGCTGTGTGTCCTGAGCTAGAACCTGTTGACCAGAGGAAACCAGAGTTGATATCTGATCGTGCTCTTCTGGTGTGGTCTCCTACTTATGATATAACAGATGCTAAATTGGATGAGTATATTACAACAGCCAAggaaaaatatggttacaatgGTGAACAAGCACTTGGTATGTTGTTTTGGCACAAACACGACTTGACCCGAGCATCCCTGGATTTGGCAAACTTCACACCTTTCCCAGATGAATGGACAGTTGAAGACAAAGTTTTGTTTGAACAGGCTTTCCAGTTTCATGGTAAAAGCTTTCATAGAATACGACAAATGTTACCAGACAAGTCGATAGCATCCTTGGTCAAATATTACTATTCATGGAAAAAGACTAGAGCACGTACTTCTTTGATGGATGTGGTTAGTGAGGGACGAAATGCAACAGGCTCCGGTACTGGAAAGTCTGGGTCAGAACAGGGGGGTTCGGACAAAGAGTCTGACAACGATGAGAAGAAGTGGACTTTCCACCGAGGTATTGTGCGCGGCGGGGCGGGAGCTGCGCGCGGCGCTCCGTCGGCCGCTGCGCAGGGCGAGGGCGGCGGCGAGAACGCGGGCAAGTGGTGTACCGTGTGCGGCATTCTGTGCTCCCAGACCACGGCGCATAACTCCCACAAGTTGTGCCAGGCATGCCTCGTGCACGCCAGGCGCACGGGCACAATGCGGCCGCTGTGCGGGCCGTCGGGGCGGCGCGGGCCGGGCAAGCCGTCGCGCTACAAGCACCGGCTGCCGCGCGGCATATACATCAACCACGACGACCTGGTCGCCATGGCCACCGGGCCGGAGCCCTGCGACCCGCCGCCGGCCCCGCAGCTGCCCAACCAGGGCGACCTCATGCTCATTGTGATGGAGCGGGAGATCGTGACGCTCAAGAAACAAGTACAACAAAATAAACAGCAACTGAGTGCTCTGAAAAGGAAAGTAGGTGACACAGGTGTGGAAGACCTCAGGCCTGGAGAGCCACCAGCAAAGGTCACTGCACGTTGGACAAACGAAGAGTTGTTAATGGCAGTCACTGGTGTCAGGAAATATGGCAAGGACTTCCAAGCCATCTCGGACATCTTGGGCACGAAGAGCGAGGCACACGTGCGTTCGTTTTTCGTGTCGTACCGCCGCCGGTACAACCTGGACGCGGTACTTCGCGAACACGAGGCCGACCGCGGAAGCTCGCATCACATACAAGCCGGAACTACAAGCACCGAGGCTGTTGAGAATTCTACCGAAACCACCAACAATGGCACCGTCTCGCCACAGACTACGAAAGATGAAAAGGTACGTAAATTATCTAAACACAGTGACATGCCAGCCAGACTACATGTTGACTTTGAGACCACTCTCATGTAG
- Protein Sequence
- MVLAERSSDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPVDQRKPELISDRALLVWSPTYDITDAKLDEYITTAKEKYGYNGEQALGMLFWHKHDLTRASLDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNATGSGTGKSGSEQGGSDKESDNDEKKWTFHRGIVRGGAGAARGAPSAAAQGEGGGENAGKWCTVCGILCSQTTAHNSHKLCQACLVHARRTGTMRPLCGPSGRRGPGKPSRYKHRLPRGIYINHDDLVAMATGPEPCDPPPAPQLPNQGDLMLIVMEREIVTLKKQVQQNKQQLSALKRKVGDTGVEDLRPGEPPAKVTARWTNEELLMAVTGVRKYGKDFQAISDILGTKSEAHVRSFFVSYRRRYNLDAVLREHEADRGSSHHIQAGTTSTEAVENSTETTNNGTVSPQTTKDEKVRKLSKHSDMPARLHVDFETTLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_01333754;
- 80% Identity
- -