Sinc006240.1
Basic Information
- Insect
- Scirpophaga incertulas
- Gene Symbol
- osa
- Assembly
- GCA_036419045.1
- Location
- CM071628.1:7575508-7602000[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-26 1.2e-22 81.6 0.0 2 89 276 360 275 360 0.94
Sequence Information
- Coding Sequence
- ATGACAGTAAGAGGCACGCAGAACGTAGCGATGCCGCCAAGAAGTTCGTCGTCGCTGCCTGAGGGTAGCGGCGCGGGGGCGCGAGCGGGCGGAGCGGGGCCGGGCGCGGGCGCAGCGGGCCCCGCGCCCAGCCCGGGCCCGCCGCCCGGCGCGCTGGTGGCGCAGCCGTATGCGCACCACCCCGCGTATAAGGCACCGCACTACCCGCCGCAGCAATACGCCTACCCGCCGCGCAACCACCATCCGTACCCGTACGGTTATCAGCCGCGTCCACCGCCGCACCCTCCGCAGCATTATCCCACGCTCAAGCCGCGGCACATGGGTCCGCCGACGCCGGGAGCAGGCGGGCCGACGGGCGCTGGCGGGCCGGGCGGGCCGGGCCCCGGCCCCGGCGGGCCGCTCGGGCCCGGCATGCTGGGCGCGGGCCCCGAGGGCACCATGCCGCCGCCCACCGCGCCCGGCGAGCCGCACGACAATgggcccgcgccgcccgccacTGCGCTCGTCACCACCGGGCCTGACGGCGCACCTCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCTTCCGCAGCGTCCGGCGAGGAGTCTTGCGGCACGCCGAAGGGCTCGCGCAAGGAGTACGGCGCGAGCAGCGCGGCGCCCTCCCCGTCGCCGGGCGGCGGCTCGCACTCCTCCGTGCACGACGACTATGACGCCTCGCCCTCCTGGCCGCGCCCGCCCTCTAGTCCCGTATTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCGGAGCGCCGCGGCTGGGTGGAGCGGCTGCTGGCGTTCATGGAGGAGAGGCGCACGCCCATCGCCGCCTGCCCCACCATCAGCAAGCAGCCGCTCGACCTGTACCGGCTGTACCTGCTCGTGCGCGAGAGGGGAGGATTCGTAGAGGTGACGAAAAACAAGACGTGGAAAGATATCGCTGGCTTACTAGGCATCGGCGCGTCATCATCCGCGGCGTACACGCTCCGGAAGCATTACACGAAGAACTTGCTGGCGTACGAGTGTCACTTCGACCGCGGCGGCATTGACCCGCAGCCCATCATCAACCAAGTGGAGGCTTCCACCAAGAAAAAGGGTGGCAAAgcgaacaataataatactgcAGGATCATCGAATTCGCAAGAGTCGTTCCagggcggcggcgccggcggcggcgcgcccATGGACGGCTACGGCGGCCAGTACGCCGGCTACCCGCCGCAGCCCAACCAGGCCCAAGGCTCTGGGCCGGGCGGGGACAACCTCGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCGCGCCGACCCCCAGGTTACCAACAGGGTTATGGATACGAATATGGATCTCCTTATCAACCAAATAGGCCGGTTTATCCTCCTTACGGCCCCGATGGTGACAGGGGGTACCGGGCAGGCGGCGGCGcgccgggcggcggcggcggcggcgcggccgggccgggcggcgcgggcggcggcgcggccgGCGAGTACCAGTACGGCGCGTACGGCGGCCAGTAccgcgcggcgggcggcgccgcgcccgcgcccccgccgcccgccgcgcagCCCTACGACTACTACCGCCCGCACcaccccgccgcgccgccgcacCCGCCGCACGCGCCGCACCCGCAGCACCCGCCGCACCCGCAGCACCCGCCGCACCCGCAGCACCCGCCGCACCCGCCGCACCCGCCGCCCATGGAGGTACGCACGCGCACTGCACACGCTCGACGCTCACCACTCACACTCACTCACACTGGCCACTGGAAACATTAA
- Protein Sequence
- MTVRGTQNVAMPPRSSSSLPEGSGAGARAGGAGPGAGAAGPAPSPGPPPGALVAQPYAHHPAYKAPHYPPQQYAYPPRNHHPYPYGYQPRPPPHPPQHYPTLKPRHMGPPTPGAGGPTGAGGPGGPGPGPGGPLGPGMLGAGPEGTMPPPTAPGEPHDNGPAPPATALVTTGPDGAPLDEGSQQSTLSNASAASGEESCGTPKGSRKEYGASSAAPSPSPGGGSHSSVHDDYDASPSWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKANNNNTAGSSNSQESFQGGGAGGGAPMDGYGGQYAGYPPQPNQAQGSGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPPYGPDGDRGYRAGGGAPGGGGGGAAGPGGAGGGAAGEYQYGAYGGQYRAAGGAAPAPPPPAAQPYDYYRPHHPAAPPHPPHAPHPQHPPHPQHPPHPQHPPHPPHPPPMEVRTRTAHARRSPLTLTHTGHWKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00284307;
- 90% Identity
- -
- 80% Identity
- -