Cpin016872.1
Basic Information
- Insect
- Catoptria pinella
- Gene Symbol
- osa
- Assembly
- GCA_963556745.1
- Location
- OY750778.1:7123703-7138421[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.3e-26 1.2e-22 80.5 0.0 2 89 251 335 250 335 0.94
Sequence Information
- Coding Sequence
- ATGTATTTCCTCTTGTTTTCAGGCACGCAGAACGTAGCGATGCCGCCGAGAACGTCATCGTCGCTGCCAGACGGCAGCGGTCCCCCGGTGCGGCCCGGCGGCCCCGGCGCGCCGGCTGGCCCGGCGCCGAGCCCCGTGCCGCCGCCCGGCGCGATGGTCGCGCAGCCGTACGCCCACCACCCCGCCTACAAGGCCTCGCACTACCCGCCGCAGCCGTACGGCTACCCGCCCAGGAACCACCACCCCTACTCGTACGGCTACCAGCCCCGGCCGCCGCCGCATCCGCCACAACATTACCCTACTCTAAAGCCCCGGCACATGGGCCCGCCGACGccgggcgggggcggcgggccGGAGGGCACGATGCCGCCGCCGACGGCGCCCGGCGAGGCGCACGACAACgggcccgccgcgcccgccaccGCGCTCGTCACCACCGGCCCCGACGGCGCGCCGCTCGACGAGGGCAGCCAGCAGAGCACGCTCAGCAACGCCTCCGCAGCATCCGGCGAGGAGTCGTGCGGCACGCCCAAGGCGTCGCGCAAGGAGTTCGGCGCGAGCAGCGCTGCGCCGTCGCCGTCGCCGGGCGCCGGCTCGCACTCGTCCGTGCACGACGACTACGACGCCTCGCCCTCCTGGCCGCGCCCGCCCTCTAGTCCCGTGTTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGCCTGCTGGCCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTCTACCGCCTCTACCTGCTGGTGCGCGAGCGCGGCGGGTTCGTCGAGgtGACGAAAAACAAAACGTGGAAAGACATAGCGGGCCTGCTAGGCATCGGTGCGTCGTCTTCCGCCGCGTATACGCTTCGCAAGCACTACACAAAGAACTTGCTCGCGTACGAGTGCCACTTCGACCGCGGCGGGATCGACCCACAGCCTATCATCAACCAGGTTGAAGCATCCACTAAAAAGAAGAGCGGCAAGGCGAATGCCAACAATACTGCAGGGTCTTCAAATTCGCAAGAATCATTcccggcgggcgcgggcgcgggcgcgggcggcgcggccaTGGACGGCTACGGCGGCCAGTACGCCGGCTACCCGCCGCAGCCCAACCAGCAGCAAGGCGGCGGGCCCGGCGGGGACAACCTCGCCGCCTCCAACCCTTTCGACGAGCCGCCGGGGCCCAGAAGACCCCCAGGTTACCAACAAGGTTACGGGTACGAATATGGATCTCCTTATCAGCCAAACAGGCCAGTTTACCCTCCCTATGGACCCGATGGCGACAGAGGGTACCGAGGCGGGGAGTACCAGTACGGAGGGTACGGCGGCGGGTACCGCGCGGGCGTGGGGGGCGTGGGAGGCGTGGGGGGcgtggcgggcggcggcggcggcgcgggcgcgggcggcgtgggcgcgggcacgccgccgcccgcgcagcCCTACCCCGACTACTACCGCGCGCCGCCGCACCCGCACCCGCCGCACTCGCCGCACCCGCCGCACGCGCCGCACCCGCCGCACCAGCCCCACCCGCCGCACCAGCCGCACCAACCGCACCAACCGCACCAGCCCCACCAGCCGCACCAACCGCCACACGAGATGTCGGGGCAGCAGTCGGTCGGTAACCTAATGAGCTCGCAGCTCGCGCGCCAGCTGGTGGCGCCGCTGCCGCCCAACCCCAGACCCTACGTACGGAGGCCCCGTTTGTACCACGCACTCAACACCGCTTTCCATCGATTGGCGATACGGTTCATTCTCACACGCACGGCACCACGTGCCGACACCGTCGATCATCGTCACACTAATCAACTAGCACTgtaa
- Protein Sequence
- MYFLLFSGTQNVAMPPRTSSSLPDGSGPPVRPGGPGAPAGPAPSPVPPPGAMVAQPYAHHPAYKASHYPPQPYGYPPRNHHPYSYGYQPRPPPHPPQHYPTLKPRHMGPPTPGGGGGPEGTMPPPTAPGEAHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEESCGTPKASRKEFGASSAAPSPSPGAGSHSSVHDDYDASPSWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKANANNTAGSSNSQESFPAGAGAGAGGAAMDGYGGQYAGYPPQPNQQQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPPYGPDGDRGYRGGEYQYGGYGGGYRAGVGGVGGVGGVAGGGGGAGAGGVGAGTPPPAQPYPDYYRAPPHPHPPHSPHPPHAPHPPHQPHPPHQPHQPHQPHQPHQPHQPPHEMSGQQSVGNLMSSQLARQLVAPLPPNPRPYVRRPRLYHALNTAFHRLAIRFILTRTAPRADTVDHRHTNQLAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01333508; iTF_00681448;
- 90% Identity
- -
- 80% Identity
- -