Sgig022801.1
Basic Information
- Insect
- Schoenobius gigantellus
- Gene Symbol
- e2f7
- Assembly
- GCA_963935595.1
- Location
- OZ012544.1:16487864-16489210[-]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-22 8.8e-18 65.9 0.0 1 65 65 131 65 131 0.92 2 3 2.1 5.9e+04 -4.0 0.0 12 28 138 153 137 155 0.61 3 3 9.3e-17 2.6e-12 48.4 0.0 1 61 166 247 166 257 0.90
Sequence Information
- Coding Sequence
- ATGTATGAAGGTGACAATATAATTTGCACTCCAAAACGAAGCGCTCTCTCTGAAGTTACAAACTCTGCAAGCTATGTTTCACCAAATGCTAACCTAAAGCTATTAACCAATGTCGCTTTGCAAGAAAACGATGTTATTAATTGTAACACACTGCAGCAGTACCCTACGCCACCGTCAAGTGCCGTGCATCGtaaagaaaaatctttgcaaattttatgtgacaggttCCTGGAGCTTTATCCTTTACATGGTAATGGCTCAGTTGAAATACAATTAGATTGCACAGCAGCACGGTTGGGTGTGGAGAAAAGAAGAATGTATGACATAATAAACATATTAGAAGCAATGCAATGTGCTGTTCATAAAAGAAAAAACACATATTTGTGGTATGGAGGGACAAGActgaatgcctttttaaaaatgctcaaaaaagaaggagagaATCTTAAATTGTCTGATGCTCTGAGAGGAAAAGCTCCTAAACCTCCATCGCCAAAGCATAAAACTTTAGGTGTAATGGCACAGAGATTTTTAATGCTCTTTTTGGTAGAACCACCTAACACACTAATAAATTTGGAAATGGCTGTAAGAGTGCTTATTGATATATCTAGCAAAAATCTGACAAGTCTCTCGCCTGAGCAGCAAGATCGCCAACATAAGTCTAAGGTCAGGCGACTATATGACATAgccaatgtttttatttctgttgGTCTCATAGAGAAAGTTTCTGGCAACTCTATTCTAAAGAAACCAGTATTTAAGTATGCTGGTCCGTTAAAAACAAAGAAACTCAATGAAGTAGTTCTTAACACACCACCGAATACTCCGCTAGAGCCACGAACGCCGTCTACCATTGTTGCCGCAAGATCAAAACGTAAATTAGAGTTCACATCATCAAATAACTGTCAAGAAATAAAatgttgtttatctacaaacacAGATACTCTATCACACAAATGGAATGAAATATTGCTGGTAGCTAACATGGAACTAACAAAGATGAATAGCGGGGAAAATGTGATTCATTAA
- Protein Sequence
- MYEGDNIICTPKRSALSEVTNSASYVSPNANLKLLTNVALQENDVINCNTLQQYPTPPSSAVHRKEKSLQILCDRFLELYPLHGNGSVEIQLDCTAARLGVEKRRMYDIINILEAMQCAVHKRKNTYLWYGGTRLNAFLKMLKKEGENLKLSDALRGKAPKPPSPKHKTLGVMAQRFLMLFLVEPPNTLINLEMAVRVLIDISSKNLTSLSPEQQDRQHKSKVRRLYDIANVFISVGLIEKVSGNSILKKPVFKYAGPLKTKKLNEVVLNTPPNTPLEPRTPSTIVAARSKRKLEFTSSNNCQEIKCCLSTNTDTLSHKWNEILLVANMELTKMNSGENVIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01020016;
- 90% Identity
- iTF_01333521;
- 80% Identity
- -