Spec005249.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- nfxl1
- Assembly
- GCA_951805265.1
- Location
- OX638203.1:25044805-25047879[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2e+04 -5.0 1.9 15 19 166 170 166 170 0.85 2 18 0.13 1.3e+03 -0.3 0.4 4 10 201 207 200 207 0.95 3 18 3e-08 0.0003 20.9 17.0 1 19 215 232 215 232 0.99 4 18 2.6e-06 0.026 14.7 16.7 1 18 268 285 268 286 0.98 5 18 0.8 7.9e+03 -2.8 0.6 5 10 310 315 310 315 0.89 6 18 3.6e-09 3.5e-05 23.8 14.3 1 19 321 339 321 339 0.99 7 18 5.6e-06 0.055 13.6 12.2 1 18 374 391 374 392 0.92 8 18 1.1 1e+04 -3.2 0.2 1 4 401 404 401 405 0.87 9 18 0.011 1.1e+02 3.1 16.2 1 18 426 443 426 444 0.94 10 18 7e-10 6.9e-06 26.1 15.7 1 18 453 470 453 471 0.98 11 18 0.00051 5 7.4 7.4 10 19 520 529 517 529 0.90 12 18 0.042 4.1e+02 1.3 4.7 1 12 539 549 539 549 0.89 13 18 2 2e+04 -6.9 4.5 14 18 577 581 577 581 0.86 14 18 0.017 1.7e+02 2.5 4.4 1 11 618 628 612 629 0.87 15 18 2 2e+04 -4.6 2.9 5 10 645 650 642 650 0.65 16 18 3e-06 0.03 14.5 17.9 3 19 659 675 658 675 0.94 17 18 2e-06 0.02 15.0 12.0 1 18 718 737 718 738 0.87 18 18 0.93 9.1e+03 -3.0 0.5 6 10 768 772 767 772 0.90
Sequence Information
- Coding Sequence
- ATGAGTAACCGCCCGAAATCTGTTAATCCCTGGACTAAAAATCAACAACCGAAGGAGAAGACTAGAGGAAGCGCTAAAGCACAAAAGTTAACCCCAACTCCTTCGGCAGagctgaaatttaaagaagCTCACGTCAAGTTACAGGCAGCTGTGCAGAAACACGCTAAGCAATATGAGTCTTCATCAGAAGAAGAAGAGTTAGAGTCTGAGGAAGTGATAGatgaaattttgaaaaactacaCTCAAACCGGGGGAAAAAACGAGCATTTAGGCCGAACTCAAGCTTTTCTGCAAGACTCTTTTCTCTCAGGAGCCGCCACGTGCCTCATCTGTATTTCACGGATCAAACGCGATTCTTCAATATGGAGCTGCTCAGAATGTTACTGTTTTTTCCATCTCAACTGCATTCGGCGATGGTCCAAAGACAGCATATTCCAACAAAAACAAGCTTTAATTCAGCCTATCCAAGTGCGAAAAATCTCAATCACCTGGGGGTGCCCCAAATGTCGACAGGACTACAACCTTGAGGACATTCCCGAGAAATACACTTGTTACTGCAAGAAAACCGTTGATCCCAAACCGCAAACTTTTCTGGTCCCCCATTCATGCGGGGAGATTTGCAGGAAGGATTTGACGCCTGTTTGCGGTCACAAATGTCTGTTGTTATGTCATCCAGGACCGTGCCCCCCTTGCCCAGTTACTGTCGCCGTAACTTGTTACTGTGGAAAACAGGCACCTAGGACGCAGAGATGCAGTAGTAAGGAATGGTCGTGTGGAGAAAAATGCGGGAAGTTGCTGGGATGTGGAAAGCATTGTTGTTTCAATCCTTGCCATTCTGGGGACTGCGAGCCCTGTGCCaaaaaaagtttgcaaaaGTGTTTCTGCAAGGCCGCACAGAAATTAAGGGATTGCGCCACACCTACGTGGAATTGTGATAAGGTTTGCAATAAGCCTCTTCACTGCGGCCACCACAAATGTATAATTGTTTGTCACGAAGGCGATTGTGACCCTTGTCCCTTGACAAAATCGAGGACTTGTCCTTGTGGGAAGAGTAAGTTCCAGTTACCTTGCACTGAAGAAACTCCAACCTGTTTTGACACTTGCGATAAACTCTTAGATTGTGAAATACACACTTGCAACAAGAGATGTCACAAGGACCCTTGTGGCCCAtgCCTAGAAACGGTGGAGAAATTATGTAGATGCGGTCTACATTCCAAAGAAATTCAATGTTACAAACCTTACTTTTGTGAAACCAAATGCAAGCGAATGAAAGACTGCAACAAACATCCCTGCAATAGAAAAtgtTGTGATGAAAATTGTCCTCCATGCGAAAAACTCTGTGGTCGCACCTTGAACTGCGGCAATCACAAATGTAGTTCGGTTTGTCACCGCGGCCCTTGCTACCCTTGTCACCAAACTGAAATTGTTACCTGCCGTTGCGGCGAAAGCAAATTGACTGTTTCTTGCGGGAGGAGACAAAAAACGAAACCGCCCAAATGCCTAAAACCCTGTTTgcTACCTCCTGATTGTCACCATGAACAACGAGAACCGCATCGGTGTCACTTTGGTGATTGCCCTCCTTGTAggcaaaaatgtaataaaagcaGATCGAACTGCTCTCATTTATGTCCAGTGCCTTGCCATTCCGCTGTTGTTGTCAAAGTTGAAGGCCAGAAACCTTCCATGCCTTGGGAACAAACCAAACCTCAGATCGAAGTGAAATCGTTGCCATGCCCTGACTGCGTTGTGCCTCTTCCAGTCACTTGTTTAGgCGGTCATGAAACTAGCGACTGGCCTTGTTACAAAGCTAGGCCGTCAAGTTGCCACCGACCCTGCGGCAGGCTGTTAGATTGCAACAATCACGCCTGCACTTTGTCATGCCACCTGGTGGAAGACGCTCTCGACGAAAGTCAAGCTGGCAAAAACTGTGAAACTTGTGAGAACAGTTGCTCCAAGCCTCGCCCAGACGGCTGTCAGCATGCATGTCCAAAAGCATGTCATCCAGGCCCATGCCCCCCTTGCAAACAAATGTTGCGCATCCGTTGCCATTGCGGTCTCAATCAACCTTATGTCGCTTGTAATCAATGGTTGTTGCTTGAAGAACGAGAAACCATTGGAAGTTGTGGCAACCAATGTCCCAAAAATTACGATTGCGGTCACAAATGCCGCGCTAATTGTCATTCCGGTCCTTGTCCAAACTCGGAAGTttgcaagaaaaaagttaaaattacttgTAAATGTAAGAGGCTCAAGAAGGAGTTTTCGTGCGAAACTGTGAGGAAGAATGTCGTTAAAGTCGATTGCGACGAAGTTTGCGCTCAGAAGAAAGAGGAGGAGAGAACACAGCGAGAAATCCTTCAAgaacagaagaagaaagagGAGGAAATAAAGAATTTGAAGGAATTGGCAAAGTACGAAAAGATGTTTGAAGGGAAGAAAAAGAATAGGGAGAGGCGAGTTTATCAGGAAGAAGAACACGTTGGTTTTTTGAAGAAGTATCGAGTTGGGCTCGCGGCTATTGGAGCTGCTTTGTTTTCtctgataatttattttctctttacAAAATAG
- Protein Sequence
- MSNRPKSVNPWTKNQQPKEKTRGSAKAQKLTPTPSAELKFKEAHVKLQAAVQKHAKQYESSSEEEELESEEVIDEILKNYTQTGGKNEHLGRTQAFLQDSFLSGAATCLICISRIKRDSSIWSCSECYCFFHLNCIRRWSKDSIFQQKQALIQPIQVRKISITWGCPKCRQDYNLEDIPEKYTCYCKKTVDPKPQTFLVPHSCGEICRKDLTPVCGHKCLLLCHPGPCPPCPVTVAVTCYCGKQAPRTQRCSSKEWSCGEKCGKLLGCGKHCCFNPCHSGDCEPCAKKSLQKCFCKAAQKLRDCATPTWNCDKVCNKPLHCGHHKCIIVCHEGDCDPCPLTKSRTCPCGKSKFQLPCTEETPTCFDTCDKLLDCEIHTCNKRCHKDPCGPCLETVEKLCRCGLHSKEIQCYKPYFCETKCKRMKDCNKHPCNRKCCDENCPPCEKLCGRTLNCGNHKCSSVCHRGPCYPCHQTEIVTCRCGESKLTVSCGRRQKTKPPKCLKPCLLPPDCHHEQREPHRCHFGDCPPCRQKCNKSRSNCSHLCPVPCHSAVVVKVEGQKPSMPWEQTKPQIEVKSLPCPDCVVPLPVTCLGGHETSDWPCYKARPSSCHRPCGRLLDCNNHACTLSCHLVEDALDESQAGKNCETCENSCSKPRPDGCQHACPKACHPGPCPPCKQMLRIRCHCGLNQPYVACNQWLLLEERETIGSCGNQCPKNYDCGHKCRANCHSGPCPNSEVCKKKVKITCKCKRLKKEFSCETVRKNVVKVDCDEVCAQKKEEERTQREILQEQKKKEEEIKNLKELAKYEKMFEGKKKNRERRVYQEEEHVGFLKKYRVGLAAIGAALFSLIIYFLFTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01283942;
- 90% Identity
- -
- 80% Identity
- -