Basic Information

Insect: Schizotus pectinicornis
Gene Symbol: -
Assembly: GCA_951805265.1
Location: OX638208.1:6539979-6541558[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0033 0.22 12.2 1.9 1 23 62 84 62 84 0.97

2 16 0.0088 0.6 10.8 1.3 2 23 90 111 90 111 0.97

3 16 4e-07 2.7e-05 24.5 2.2 1 23 117 139 117 139 0.99

4 16 3.7e-07 2.5e-05 24.6 1.3 1 23 145 167 145 167 0.98

5 16 0.027 1.8 9.3 1.4 1 23 175 198 175 199 0.95

6 16 4.9e-05 0.0034 17.9 1.9 2 23 205 226 204 226 0.97

7 16 0.0001 0.0068 16.9 1.5 1 23 231 254 231 254 0.98

8 16 0.0005 0.034 14.7 0.3 2 23 258 279 258 279 0.96

9 16 1.1e-05 0.00073 20.0 1.2 2 23 286 308 285 308 0.96

10 16 3.3e-07 2.3e-05 24.7 1.9 1 23 315 337 315 337 0.98

11 16 7.5e-07 5.1e-05 23.6 1.2 1 23 341 363 341 363 0.97

12 16 4.9e-07 3.3e-05 24.2 1.4 1 23 369 391 369 391 0.97

13 16 0.0003 0.02 15.5 3.1 1 23 397 419 397 419 0.96

14 16 5.5e-05 0.0037 17.8 1.9 1 23 425 447 425 447 0.98

15 16 0.0014 0.096 13.3 5.9 1 21 453 473 453 477 0.91

16 16 0.00022 0.015 15.9 0.7 2 23 485 507 484 507 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0033	0.22	12.2	1.9	1	23	62	84	62	84	0.97
2	16	0.0088	0.6	10.8	1.3	2	23	90	111	90	111	0.97
3	16	4e-07	2.7e-05	24.5	2.2	1	23	117	139	117	139	0.99
4	16	3.7e-07	2.5e-05	24.6	1.3	1	23	145	167	145	167	0.98
5	16	0.027	1.8	9.3	1.4	1	23	175	198	175	199	0.95
6	16	4.9e-05	0.0034	17.9	1.9	2	23	205	226	204	226	0.97
7	16	0.0001	0.0068	16.9	1.5	1	23	231	254	231	254	0.98
8	16	0.0005	0.034	14.7	0.3	2	23	258	279	258	279	0.96
9	16	1.1e-05	0.00073	20.0	1.2	2	23	286	308	285	308	0.96
10	16	3.3e-07	2.3e-05	24.7	1.9	1	23	315	337	315	337	0.98
11	16	7.5e-07	5.1e-05	23.6	1.2	1	23	341	363	341	363	0.97
12	16	4.9e-07	3.3e-05	24.2	1.4	1	23	369	391	369	391	0.97
13	16	0.0003	0.02	15.5	3.1	1	23	397	419	397	419	0.96
14	16	5.5e-05	0.0037	17.8	1.9	1	23	425	447	425	447	0.98
15	16	0.0014	0.096	13.3	5.9	1	21	453	473	453	477	0.91
16	16	0.00022	0.015	15.9	0.7	2	23	485	507	484	507	0.97

Sequence Information

Coding Sequence: ATGACCACCGCAACCCTCCACCAACAAGACCAGGAAGAAATTTACATCAAATACGAAATTTTCGAGCCTCCAATCGCTATCAAACAAGAGACCCCTGACCCGCCGAGCCCCCTGGCTTCCATTTCTTCACCCCTCGTCAAATGTAAAGCCAACGGCCGAGACGACCCTGTCGACAACACTGCCTACAATTGCGACGTTTGTAGCAAAGTTTTCCGAGTATTCTTGGAGTTCCGGAGCCATAGAAAACAGCATTTTGTCGAGAAACGTACTTGCAAAATATGCCAAGTCACCTGTCAAAGCGTCAGTAAATTAGAGATTCACATGAATGGCCACTTGGGGTTGAAGCCGTTCAAATGCGAGGAGTGctcgaaaaattttgtttcgaaaAACCAATTGAAATTGCACATGCGGAGCCACTCAGACGAAAAGCGGTACAACTGCTCGAAATGTGGGAAGGCCTTTCGGCATTTGGGGTCGCTTCGCGCCCACATGACCGTCCACAACGACGCGAAACTCGGAGAGTTTCATTGCAAGGTTTGCACGGAGGCGAGTCCAACCCTGGAAGCTTATCGCAAACATCTCAGCGTCATCCACCACAAGAATCTCGAAATTCAATGCCAACTCTGCAAACGTTTCTTCTCGTCAGATCGCAACCTTCAAACCCATCTCAACACCCACACCGAACTGAAGTACCCTTGCGAACATTGCTCGCGCATTTATCCCTCACTTTACCGCCTCAAACGCCACATAAAGCGCGCTCACATTCCCAATGTTTGTGACGAATGTCCCGCAATTTTCTACGACCGCTCCGCCTTCACCAAACACAAGAAACAACACGGCGACAACAAACCGTCGCGTTGTCCTCATTGCGGCAAGTTGTTCGACAAACCGAAGAACTTGAGCGAGCACATCCGGTTGCAGCACAAAGAGGACGGCAACCAGCACAAATGCGATCTTTGCGACAAAGTTTTCATCAACTCGTCGCTATTAAGAAATCACGTCAAAACTCACGATAAATGTTTCAAATGTGGGGATTGCAACAAGGTTTTCAGTTCGAGGTACAATCTCGAGACGCATTCCGTCACGCATTCGGGGGAGAGAAACCACAAATGCGAGATTTGCGGCAAGGGTTACTCGACTAAAAGTAGTTTAAAGAACCACACAGCCATCCATACCGATGTTAGAAACTTTAAATGTGATTTGTGTCCGAAGTCGTTTAAAACTAACCGCAGGTTGTACGTTCACAAATTCTCGCACGCCACTGAGGAGAAGTTTCAATGTGATATTTGTAAGGCTCGATTTCGGGTTAAGCAATATTTAAAGTACCATATGATCAAGCACTCGGGTTTGAAGCCGTTTGAGTGCAAAGTTTgtaataagaaatttaaacatAAAAAGTCGTGGGAGAAGCATTCAAACCACGATCAGCATAAGACCAAAGGGGAGATGGTTCAATGCGGCCATTGCGGCGAGAAATTTAAAGGCAAAACTGTGCTTTTGGAGCACATTAGGTCTCAGCACGAGAGGCTGTAA
Protein Sequence: MTTATLHQQDQEEIYIKYEIFEPPIAIKQETPDPPSPLASISSPLVKCKANGRDDPVDNTAYNCDVCSKVFRVFLEFRSHRKQHFVEKRTCKICQVTCQSVSKLEIHMNGHLGLKPFKCEECSKNFVSKNQLKLHMRSHSDEKRYNCSKCGKAFRHLGSLRAHMTVHNDAKLGEFHCKVCTEASPTLEAYRKHLSVIHHKNLEIQCQLCKRFFSSDRNLQTHLNTHTELKYPCEHCSRIYPSLYRLKRHIKRAHIPNVCDECPAIFYDRSAFTKHKKQHGDNKPSRCPHCGKLFDKPKNLSEHIRLQHKEDGNQHKCDLCDKVFINSSLLRNHVKTHDKCFKCGDCNKVFSSRYNLETHSVTHSGERNHKCEICGKGYSTKSSLKNHTAIHTDVRNFKCDLCPKSFKTNRRLYVHKFSHATEEKFQCDICKARFRVKQYLKYHMIKHSGLKPFECKVCNKKFKHKKSWEKHSNHDQHKTKGEMVQCGHCGEKFKGKTVLLEHIRSQHERL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01283611;
90% Identity: -
80% Identity: -