Basic Information

Insect: Schizotus pectinicornis
Gene Symbol: -
Assembly: GCA_951805265.1
Location: OX638207.1:9096015-9100288[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.77 52 4.7 0.8 6 23 199 218 199 218 0.90

2 25 0.0033 0.23 12.2 3.6 2 23 226 246 225 246 0.98

3 25 8.2e-05 0.0056 17.2 2.5 1 23 252 274 252 274 0.98

4 25 6.8e-06 0.00046 20.6 1.6 1 23 280 302 280 302 0.98

5 25 5.2e-07 3.5e-05 24.1 1.1 1 23 308 330 308 330 0.98

6 25 1.3e-05 0.00087 19.8 1.0 2 23 339 360 338 360 0.97

7 25 3.2e-05 0.0022 18.5 1.5 1 23 365 387 365 387 0.95

8 25 1.5e-05 0.001 19.5 0.1 1 23 393 415 393 415 0.97

9 25 3.4e-07 2.3e-05 24.7 0.7 1 23 421 443 421 443 0.98

10 25 0.0011 0.075 13.7 0.6 1 23 449 471 449 471 0.98

11 25 1.1e-05 0.00078 19.9 3.4 1 23 477 499 477 499 0.99

12 25 0.22 15 6.4 1.3 6 22 605 621 603 624 0.90

13 25 0.0006 0.041 14.5 7.9 1 23 629 651 629 651 0.94

14 25 2.7e-07 1.8e-05 25.0 1.1 1 23 657 679 657 679 0.98

15 25 0.0046 0.31 11.7 0.1 1 20 685 704 685 707 0.92

16 25 3.8e-05 0.0026 18.3 0.8 3 23 717 737 716 737 0.97

17 25 0.00012 0.0081 16.7 0.7 3 23 751 771 749 771 0.95

18 25 0.00025 0.017 15.7 2.4 1 23 776 798 776 798 0.98

19 25 2.9e-06 0.0002 21.8 0.4 1 23 804 826 804 826 0.97

20 25 1.4e-05 0.00097 19.6 4.4 1 23 832 854 832 854 0.97

21 25 3.3e-05 0.0022 18.5 2.3 1 23 860 882 860 882 0.99

22 25 5.4e-06 0.00037 20.9 0.2 1 23 888 910 888 910 0.98

23 25 6.5e-05 0.0045 17.5 3.6 1 23 923 945 923 945 0.98

24 25 3.7e-05 0.0025 18.3 0.8 1 23 957 979 957 979 0.98

25 25 4.6e-08 3.1e-06 27.4 0.7 1 23 991 1013 991 1013 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.77	52	4.7	0.8	6	23	199	218	199	218	0.90
2	25	0.0033	0.23	12.2	3.6	2	23	226	246	225	246	0.98
3	25	8.2e-05	0.0056	17.2	2.5	1	23	252	274	252	274	0.98
4	25	6.8e-06	0.00046	20.6	1.6	1	23	280	302	280	302	0.98
5	25	5.2e-07	3.5e-05	24.1	1.1	1	23	308	330	308	330	0.98
6	25	1.3e-05	0.00087	19.8	1.0	2	23	339	360	338	360	0.97
7	25	3.2e-05	0.0022	18.5	1.5	1	23	365	387	365	387	0.95
8	25	1.5e-05	0.001	19.5	0.1	1	23	393	415	393	415	0.97
9	25	3.4e-07	2.3e-05	24.7	0.7	1	23	421	443	421	443	0.98
10	25	0.0011	0.075	13.7	0.6	1	23	449	471	449	471	0.98
11	25	1.1e-05	0.00078	19.9	3.4	1	23	477	499	477	499	0.99
12	25	0.22	15	6.4	1.3	6	22	605	621	603	624	0.90
13	25	0.0006	0.041	14.5	7.9	1	23	629	651	629	651	0.94
14	25	2.7e-07	1.8e-05	25.0	1.1	1	23	657	679	657	679	0.98
15	25	0.0046	0.31	11.7	0.1	1	20	685	704	685	707	0.92
16	25	3.8e-05	0.0026	18.3	0.8	3	23	717	737	716	737	0.97
17	25	0.00012	0.0081	16.7	0.7	3	23	751	771	749	771	0.95
18	25	0.00025	0.017	15.7	2.4	1	23	776	798	776	798	0.98
19	25	2.9e-06	0.0002	21.8	0.4	1	23	804	826	804	826	0.97
20	25	1.4e-05	0.00097	19.6	4.4	1	23	832	854	832	854	0.97
21	25	3.3e-05	0.0022	18.5	2.3	1	23	860	882	860	882	0.99
22	25	5.4e-06	0.00037	20.9	0.2	1	23	888	910	888	910	0.98
23	25	6.5e-05	0.0045	17.5	3.6	1	23	923	945	923	945	0.98
24	25	3.7e-05	0.0025	18.3	0.8	1	23	957	979	957	979	0.98
25	25	4.6e-08	3.1e-06	27.4	0.7	1	23	991	1013	991	1013	0.99

Sequence Information

Coding Sequence: ATGGAGAGACCAGGTGTGGAGAACTTCGCACTCATAACCACAGCCGATTTCGACAGGATTTGTAGATGTTGTCTATCAACAGGCAGCCTACATAACATATTTGAGTATTCCTCCaacaagaaaactttttttgaccACTATAAAGCCTTCTGTGCTATTGAGGTGAAACCTGACGACAATCTTCCTCAAAGTATATGCGAACAGTGTGTGACCAAGCTAGTCTTCATGTATGACTTCAAAAACAAGTGCGCCAGGTCAGAGAAGCTGTTAAAAGAATTATTAGCGACGATCGGCAAAGCTCATATTAAAGATGAAAATCATGGAGAGGAAGCCACTCACAATATTGACATAAAAGAAGAGAATTGCGAAAGTGAGGCAAATAGTTCCACTTTCATGGACAATATTGATATAAATGAGAATTTTCATATTGCTGAAATTGATAAgtttaaattagaaaacgaTTGCGATGTTGATGTAAAAGCAGAAAGTTACACTTGTGAGTTAATGGTCAATGCTGAGCTTGAATGTGGAAAGTCTATCACAAGTCAAGAGGTAGAAGTGCCAAAAACTGCCAAAAAGCGGAGTTGGTTATGTTGCCAAGAAACCTTCACTACTTACCTTAGTTTCATTAGACACTATAAAAGAATGAACCATCAAAAATCAGACAAACATCAAAAGTGTCCAGTTTGTGATAAAAGTTTTCATGGACATGGAATCAGGCAACATATGAGAACCCACACTAAAGAAAAACCGTATATTTGCAAATTCTGCTTTAAGCAGTTTAGTTTATCAGGTAACTTAAGTCGTCACATAAAGAGACACACAGGGGAGAGACCTCATGTTTGTGATGTATGTGGAAAAGGTTTTATCCAAGCTCACTCCTTGGTGAATCACAAACGTACCCACACAGGTGAAAAACCTTTCCCTTGCCCTGAGTGCGACAAGAAATTTGTACAATCCAAAACCCTTCAAACGCACTTAAAGAAGCACCAACTCAAATCGGGACGTCCATTGGAGTGTGAGACATGTAGAAAAGTATTTAGTACAAAATACGTGTTGCAAAATCACATGCTCAGACATGGAAAAAAGTCTTTTCTGTGCAGTCATTGTGGTAAAAGTTTTGCGACTAACGGAGGCTTAAGTTCGCATTTTAAAGTTCACACCGGAGTGAAATCGTACGAGTGTGAGTCTTGTGGCAAACGTTTTGCGAATTTGGGAACCTTGAACTCGCATATTCTGCTTCACACTGGGGAAAAACCGTTTAGTTGTGAGGTTTGTTCGAAGAGTTTCGCCCAAAAGGGGAATTTACGTCTTCACTTGAGAATGCACAGGGGAGAGAAACGTTACAGCTGTTCGTTATGCACGAAATCGTTTTTGTTGCGAAGTGCCTTGACGGTACATGTGAGGATGCACACTGGGGAAAGACCGTATGTTTGTGACGTTTGTTCTAAAGGGTTTCATTCATCGAGCAACTTAAAACAGCACAAAAGAAGGCATAATACAGCAACTAACACCGAAAATAATCTTCGGGGCAAAGATGAAACTTTACGAGGCTCTGTCAACACCAGTATTGAAGACAGCAAATTATCTGAAACTCGTGGAAAGGGTTCAGATAATGGTGACAATATAAAAGATACATTATCAGTAGATGAAGGTGACAAACTGAAAGAAACGAAGAGATTGAAGTCAAAAACGTACACCTGTTCTTGCAAAGCTTCATTTACCAGCCATTTGAAATACTTGAAGCACCGCAAAGAACTCAACCATTGTTACCGGCCTAAAACGGCGAAACTTAGAATTAAGCAGTGCAGTTGTGGTTTAACTTTCGCtgatcaaacaaaatttttgaaacaccgCAGAGAATCGAAACACTTGCAGCGTCAGCACTCCTGCATCTATTGCAGTAAAAAGTTCAAGAGTAGCCAACATTTAAAAAGACACCTGCGCACCCACACGAAAGAAAAGCCCTATCCGTGCCAAGTATGCTCGAAACAATTCCCCACCAACTACAATTTACAAAGACACATGATGAGGCACACAGGCGAACGACCTCACGTTTGCGAGTTCTGCGGCAAAGGCTTCATAGAAATCAGCGGATTGAAGGCCCACTTACCGAGCCACACCGATGCCGCCCCCGAGCCTCCAATTTGCGGCGTATGCGGTCAACAATTTCGCTCGCAATCCTCGTACACGCAGCATCTGAAACGGCACGAAACCGCTTCGAATCCGGGACTGACGCGGAGCCATCTGTGCGATGCTTGCGGCAAATCCTTCGATTCGAAAGCGTACTTGTTGCAGCATTTGATCACGCACGGCGAGAAGAAATTTTCGTGCGACAAGTGCGAGAAACGGTTCTACGCCAGAGGAGCTCTGGAGTCTCATCACCGAACGCATTCGGGGGAGAAACCGTACGTTTGCGGCTACTGTCAGAAGTCGTTCACGCAACCCGGTTCTTTGAAAATTCACACGTACATTCACACCGGCGAAAAGCCGTTCAGTTGCAACATTTGCTCGAAACGTTTCACGCAATCGACCCATTTGAAGTACCATATGGTTTCGCATACCGGGGAACGGGCGTACAGTTGCCCATATTGCGATGACGCCTTTTCCTTCAAGTGCAATCTCACTATTCACATCAGGAAGCACACCGGGGAAAATCCGTACGAATGTGAGGTTTGCGGGGAAGGGTTTCGGGCCTCCGATAAATTGAAGAAGCATCAACGACTTCACCAGAATCATTCCAAAAGTGAATTGGACCAAAAACCGTTTGTTTGTGACGTTTGTTCTAAAGGGTTTAGGAAGTCGAATCATTTAAGTAGTCATAAAAGGACTCATGAAGAGGTTGATAGGGAAGTGGGGGCGAAACCGTTTGAGTgtgaaatttgtttcaaaggATTCAAGGTGCTCAGGAATTTGAGGCGGCACGAGAAGATTCACGAGGACACCAAAAATAACGTTGATTTGAAGTCTTATAAATGCGAGGTGTGTTCGAAAGGGTTTAGGACCCCCAGTAACTTGAAGAGACATGCCAGAGTTCACGGAAAAAAAGACAATACAGAAGTTTTGGTGTAA
Protein Sequence: MERPGVENFALITTADFDRICRCCLSTGSLHNIFEYSSNKKTFFDHYKAFCAIEVKPDDNLPQSICEQCVTKLVFMYDFKNKCARSEKLLKELLATIGKAHIKDENHGEEATHNIDIKEENCESEANSSTFMDNIDINENFHIAEIDKFKLENDCDVDVKAESYTCELMVNAELECGKSITSQEVEVPKTAKKRSWLCCQETFTTYLSFIRHYKRMNHQKSDKHQKCPVCDKSFHGHGIRQHMRTHTKEKPYICKFCFKQFSLSGNLSRHIKRHTGERPHVCDVCGKGFIQAHSLVNHKRTHTGEKPFPCPECDKKFVQSKTLQTHLKKHQLKSGRPLECETCRKVFSTKYVLQNHMLRHGKKSFLCSHCGKSFATNGGLSSHFKVHTGVKSYECESCGKRFANLGTLNSHILLHTGEKPFSCEVCSKSFAQKGNLRLHLRMHRGEKRYSCSLCTKSFLLRSALTVHVRMHTGERPYVCDVCSKGFHSSSNLKQHKRRHNTATNTENNLRGKDETLRGSVNTSIEDSKLSETRGKGSDNGDNIKDTLSVDEGDKLKETKRLKSKTYTCSCKASFTSHLKYLKHRKELNHCYRPKTAKLRIKQCSCGLTFADQTKFLKHRRESKHLQRQHSCIYCSKKFKSSQHLKRHLRTHTKEKPYPCQVCSKQFPTNYNLQRHMMRHTGERPHVCEFCGKGFIEISGLKAHLPSHTDAAPEPPICGVCGQQFRSQSSYTQHLKRHETASNPGLTRSHLCDACGKSFDSKAYLLQHLITHGEKKFSCDKCEKRFYARGALESHHRTHSGEKPYVCGYCQKSFTQPGSLKIHTYIHTGEKPFSCNICSKRFTQSTHLKYHMVSHTGERAYSCPYCDDAFSFKCNLTIHIRKHTGENPYECEVCGEGFRASDKLKKHQRLHQNHSKSELDQKPFVCDVCSKGFRKSNHLSSHKRTHEEVDREVGAKPFECEICFKGFKVLRNLRRHEKIHEDTKNNVDLKSYKCEVCSKGFRTPSNLKRHARVHGKKDNTEVLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01330250;
90% Identity: iTF_01330250;
80% Identity: iTF_01330250;