Spec010931.1
Basic Information
- Insect
- Schizotus pectinicornis
- Gene Symbol
- lilli
- Assembly
- GCA_951805265.1
- Location
- OX638206.1:11446263-11466599[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3e-12 4.6e-08 32.9 0.3 4 97 8 97 5 140 0.71 2 3 0.09 1.8e+03 -2.0 0.4 200 218 171 189 148 214 0.64 3 3 0.015 3e+02 0.5 0.1 349 382 224 257 211 278 0.79
Sequence Information
- Coding Sequence
- ATGTTCGGGTGGTGGAGCGTGGAGAGAGATCGCCTGCGCGAGCGGGAGAGGCAGGCCCGGGCCCAGATGTCTTCGCAAGTGGACGAACAGGAGAGCTGCCTTTTCGGAGCACCCGTCAGGGTGAACCCGTCCTCCGTAGACCCCGTCACGCAGCAGATCCAGAGCAAGCTAGGAAATTTCCAAAAGCTCAAACATCTCCTCGACCAGAAGGAACTGATCGGGGTAGATGGCGTGCCGCCCAGTCCGGGGGTGTCGTTATCGAGACAGCACCATTCATTCCCGAACTCATCAGGACCGCCCTCCAGGTTACAGCCGTCTCCAGAATCTCGTCCGGAATTCAAGAAACCTCACCATCAGAACGTCCATCCGCACCAAAGAGGCGGCTACGTAAAGCCGGCCGACGGGAAGCCGCCCTACGAGGGTAGAGGCGGCTATCCTGGACAACCGGTGAAGCATGGCAGCGGCATCACGAATCACAGGTCCAACGGGATCGTTCCCGCCAAGGGACCACCTCAGTCTTCGCCGACGGCCAGTCTGCAGTCATCGAGCTCTTCGGGACGGGTGCACGGTAGCGGCGCGTCACGCAATCCTCGCATTCCCTACGAGCAGAACCAAGGACCTACGGCCGGCCCAAGGGAACCCCTGCCTTCCGCCACTCCTAATCCAGATATGGAAAACATTTTCAAGGAAATGATAGAAGTTCGAATGCCTCTCACCGCCATCGCCGCTACTCCCAGGATAGAGCCCGATAATAAGTTCACCTTCAATTCTGTTCTCGCCAAGCTTTCTCATTCGTGGTTCAATCGCGTCAGTTTTCAGGAGCCAATTTCGGTTTTAGAAAGCGGGTGCATTTGTCAAGCCAAAAACAGAAATCAACACGATACAAGTAAACACTACATGCTTGCAGTTGACCGAGTCGACACCGGAGGCGCCGTCTACAAACACGCCAAAGAGTAA
- Protein Sequence
- MFGWWSVERDRLRERERQARAQMSSQVDEQESCLFGAPVRVNPSSVDPVTQQIQSKLGNFQKLKHLLDQKELIGVDGVPPSPGVSLSRQHHSFPNSSGPPSRLQPSPESRPEFKKPHHQNVHPHQRGGYVKPADGKPPYEGRGGYPGQPVKHGSGITNHRSNGIVPAKGPPQSSPTASLQSSSSSGRVHGSGASRNPRIPYEQNQGPTAGPREPLPSATPNPDMENIFKEMIEVRMPLTAIAATPRIEPDNKFTFNSVLAKLSHSWFNRVSFQEPISVLESGCICQAKNRNQHDTSKHYMLAVDRVDTGGAVYKHAKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -