Basic Information

Gene Symbol
TRERF1
Assembly
GCA_951805265.1
Location
OX638204.1:10854151-10879706[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-12 1e-09 38.4 0.2 2 46 1131 1175 1130 1175 0.96

Sequence Information

Coding Sequence
ATGGAACGGACGCGACAATGGAATCCTGCAGGAGTGCAGGAGACGTACGTCGTGATGTATGGGGGTGGGAACGAAGCCGTTACAGCCACCTTCGATCTGTTCGACTCGTCGAGTGGCCCGGACCTCACTCTGTCCCCACAGACCTTTACGAACTCAGCTGAGGCCTTTATCAACGACAACTCCAACAGCCTGGGAGTCCCGACGGACAACGACGCAGTAACGACGACAACGGATGACAAAAAGGCATCCAACAACAACACGTCCGAAGCGGTGAAGTTGACGGTGAAAAGGGCACGACCTAAAGCCGCATCGCCAAACAGACAGGGTCCTCAGCAATGTCAGGTGTGCGCCAAGGTATTCGGCAACGCTTCAGCTCTAGCCAAACACAAACTGACACACAGCGACGAGCGGAAATACGTCTGCACAATGTGCGGGAAAGCGTTCAAACGACAGGACCACTTAAATGGTCACATGCTGACGCACCGCAATAAAAAACCGTACGAATGCAAAGCGGAAGGCTGTGGAAAAAGTTACTGTGATGCTAGATCGCTAAGGAGACACACCGAGAACCACCACAGTTCGTCGACGGTCAACACCACGACGACGATGTCACCGGCACAGGGGGCGGCGTCGGGGGACGCCGCTTCACCACACGGTTCCAGCTGCATCCAGTATGCGCCCCCGCCCACCTCCACCACGAACGGGAAAAGTCAACTGCAACAGCTTTTAGCTACGGAGCCGGCAAAGGGCGGCAGTGGCGGCAACAACGACGGCCTGACTAAGCAACAACTGGATCTGATACATCAAATAATGGAGCAAACCCAGAGACAATCCCAATCCGCCAGCAAACCGACAACAAAGCCAACCGCGAAACCTATTAGCAAAACACCAGTCAAAGTACAGAGGGTGTGGACCTCGACGACGCAACAGAGTTCATCAAACAAAACGAGCGGCAGCGCCACGAGTCCGCAGGCGAAAGTCACCACCACCACCCCTGCCACGTCCCCGGCAGCCACCCCCAACAAGGCGGAACCGAAGCCCGTCGAATGCAACCTGTGCCACAGGAAGTTCAAGAACATACCGGCCCTCAACGGCCACATGCGATTGCACGGCGGGTACTTCAAGAAGGATGCCGAGAACAAGAAATGCGAAAAGAAAGACGCCAACGCCCCCCCTTTACAGACGGCCAGCGTCAGCGTGCGCGCCCTAATCGAAGAGAAAATCATCAACAAGCGCATCACTAATCCCCAGTCGTCCGGTTCCAGCGAAGACTCGTCGAAATCCTCGGCCCCGCCACTCTTCCCCCTCACTGTGCATTCCTCTGCGACCTCCAACGATCTGGACACGAAGATCACTTCTTTCGTGGTACCGGCGCCCCCTCAGCAAACGGCGGAGAAAGCACGAAGACATTCCGACGCCGAGGCTTTCAACAGAGCCTCAACCACACAACAGAAGGCCGAAGCTTTGGCGGATCTCATCCTGAAAAGAGACAAAGTTTCAGTCAAACGCACTACCTCCGATCCCGGACAATCCTCGCAAATCATCCAGTTCCAGTCGGATTCTTTCATAACGAGCGTGGCCTATCAGGCCGAAGATGGAGAGTACTTGTCGCCGAGTCTccaagatgaagttttcactCAAGTTCAAGACACCATGCTATTGCAGGGTGTCGACCCCCACCAATTGGCTTCGATCCAGTTCCAAGCGGACACTCTCCTCCAAGACCAAAATGACCAGCAACTCCAGGACATGGCCCTAGAGGACTACACGAATTTGCAGGAAGCCGTACAATCACCTTCGTACCAATCAAGCCATTCGGTTAACCAAGAACTACAAGCTGTTCTAGACTCGCCTTTACCTGAAAGTCTGGCGGAATTCAGCACGTTTCATTCTGCAACTAGTTTAGATATACCTTCGCCTAGTTACCAAACGCAATCACCTGCGCAGTACACGGGGTCACCTCATACGTCACTAACAGCACAATCTCCCTTACAAAGTCCGTTGATACGTCACGATTCACCCGGGTTTGCGTATCCAACACCCCCGGCGAGTCACGAAGGCCAAAGTCCCTGTTTTGGACAAAACTCGTTGCTTCCTATGGTTTCGCCAAAACAAGAATTCGGACAAGTCATCGAGCGAGGAGTCGACGAACCTCCTCAAGCTTCCTCCCCGCTTTCAGCAGCTTTCTTCACGTCAACCATGTCGAGTTCAGCGGCCGTCGAAGAAGCGCTCGAAGAAGTTCTTCCAGGCGAAAGCATACCAAGCGACGATATTTACCCTCTAAATTCCCCGCCCCCACAGTCACCCCTTTCCGTTGGATTAACCCCAGTACCTTCACCTCTATCGAACATAGTAACAAGTTCGGTACCGTCACCTCACCCATCGTCAACATTTATTTCCTCCCCAAACACAGTAACGTTTCCAATGTCACCGCATTACACCCTCCAATCGCAAATGATGCCAAATTCCGAAGATCCGCTATTATCAAGCAGTCCCAAAGACTTCGCCACGAggaaaaagtttgaatttaaCGGAGTTCCTTTGAAAGTGATCAGCAACAACGGCCTTCTCGATTTGAACAGCTCGAATTTTGCCGGTATCCTCGTCGATACTAAcggcgaaattaaatttatacaaaCCGGAGGCAACACTTTTCAAGCGAAAAACTTTTTAGTCGCCAACACCTCCTTGATAACTCACGAAGGGGGTGACgataaaaaattccaaaaagtgCTCAAAACAGTAGCTATACCAACGAAACAAATCATAACGAGGCCTAAAAGGGAAGAGAACAACGACGTTTTTTTGAGTCCAACAACGATCCCCGCGAGTCCTGTTAAAGTTTCAAGGAAACGGCCCAGAAACGAACCGCTGCAACTCCCGGTTTTCCACCAATCGAAATTGAGGGCGACCAGGAGTAAACCGCAAGGGTTCGCGCCTTTCACCCCCCAGCCGATTTTGAACCCCCAGAGGCCCGGAACGGggttatttgcaaatttgaaaccgAAATCAGtttCAGACGAGGATCCTAGTTGGAGTAGTGATCCTATTCCAGAAAGCGATTCCACGCCGCACATAAACGTGGGGCCTCAATTCCAATGCAATATTCCTCCTTTTACATCCGCCCCTAACAGGACGAATCCTGAACCAACATACGAAGACCTCCTTTGGGACCCCGGTATAAACAACTGTACGGACACTGAAGTTGACATGTACTTGGATTTCGCGTGCTGCGCTGCAGTTCCTGGCGGAGGAAGGAACAAGGAGTACGCCATGCATCTTTTACACTTGTGTGGGGGAAACATACACGACGCCATGTTGAAACTAATGCAGCCAACGCCTCATCTTCCTTCCGACCATCCGTTGCTCTGCTATCAATATAGCGAAGGCGAAAAGTGGACGGCGACGGAAACGCAGCTTTTCCACAAGGCTTTGCTTAAATATGAAAAAGACTTCCGAAGCATTGCTCAAGAGATcggaacaaaaacaataaaacagtGTGTGCAATTCTATTACGTTTGGAAGAAAGTTTGCACAGACGAATACCGAAGGCTCAAACACTTGCGAGAAAGAAGACACAATCATTCAAAGGTATTAGAGTCTGAACTGGACGATAAACCTTATCCAGATGCCAAATTATTAGGGATTGTAGATAGCGGTTCCCCCATGCCAATTCAAGAAACCAGAAGTTTTATTTGCGAATTCGCAGACTGCTCAGCTAGTTTTAACTCTCGTGCCGCCCTCAACGGGCACATACGAATCCACGGTGGTACAGCCAGGAACTCGCCAATACCCTCATCGACAGAGAAACGAGCGCCCTCTGTAAGTTCATCCGTTTGTCACCCTGACTCGACTGAAGATTACCCCTGTAAGATATGCGGGAAAGTTTTTACAAAGATCAAGAGCCGCAGTGCCCATATGAAATCGCATCGTCCCCCCGATGCCGAGCCTGCGAAACGCAAAGAAAAGGAGCTTCAATCTTCGTGTGCAAGTTTCGAACTTTCCGTGCCAAGCCCGTTTAGCACTTAG
Protein Sequence
MERTRQWNPAGVQETYVVMYGGGNEAVTATFDLFDSSSGPDLTLSPQTFTNSAEAFINDNSNSLGVPTDNDAVTTTTDDKKASNNNTSEAVKLTVKRARPKAASPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSSTVNTTTTMSPAQGAASGDAASPHGSSCIQYAPPPTSTTNGKSQLQQLLATEPAKGGSGGNNDGLTKQQLDLIHQIMEQTQRQSQSASKPTTKPTAKPISKTPVKVQRVWTSTTQQSSSNKTSGSATSPQAKVTTTTPATSPAATPNKAEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKDANAPPLQTASVSVRALIEEKIINKRITNPQSSGSSEDSSKSSAPPLFPLTVHSSATSNDLDTKITSFVVPAPPQQTAEKARRHSDAEAFNRASTTQQKAEALADLILKRDKVSVKRTTSDPGQSSQIIQFQSDSFITSVAYQAEDGEYLSPSLQDEVFTQVQDTMLLQGVDPHQLASIQFQADTLLQDQNDQQLQDMALEDYTNLQEAVQSPSYQSSHSVNQELQAVLDSPLPESLAEFSTFHSATSLDIPSPSYQTQSPAQYTGSPHTSLTAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPCFGQNSLLPMVSPKQEFGQVIERGVDEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGESIPSDDIYPLNSPPPQSPLSVGLTPVPSPLSNIVTSSVPSPHPSSTFISSPNTVTFPMSPHYTLQSQMMPNSEDPLLSSSPKDFATRKKFEFNGVPLKVISNNGLLDLNSSNFAGILVDTNGEIKFIQTGGNTFQAKNFLVANTSLITHEGGDDKKFQKVLKTVAIPTKQIITRPKREENNDVFLSPTTIPASPVKVSRKRPRNEPLQLPVFHQSKLRATRSKPQGFAPFTPQPILNPQRPGTGLFANLKPKSVSDEDPSWSSDPIPESDSTPHINVGPQFQCNIPPFTSAPNRTNPEPTYEDLLWDPGINNCTDTEVDMYLDFACCAAVPGGGRNKEYAMHLLHLCGGNIHDAMLKLMQPTPHLPSDHPLLCYQYSEGEKWTATETQLFHKALLKYEKDFRSIAQEIGTKTIKQCVQFYYVWKKVCTDEYRRLKHLRERRHNHSKVLESELDDKPYPDAKLLGIVDSGSPMPIQETRSFICEFADCSASFNSRAALNGHIRIHGGTARNSPIPSSTEKRAPSVSSSVCHPDSTEDYPCKICGKVFTKIKSRSAHMKSHRPPDAEPAKRKEKELQSSCASFELSVPSPFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01480056;
90% Identity
iTF_01283321;
80% Identity
iTF_01330094;