Basic Information

Insect: Schizaphis graminum
Gene Symbol: ZBTB41
Assembly: GCA_003264975.1
Location: QEWZ01006345.1:781-6428[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00044 0.042 14.8 2.0 3 23 254 274 253 274 0.97

2 10 4.3e-05 0.0042 18.0 2.9 1 23 280 302 280 302 0.98

3 10 0.00024 0.023 15.7 0.8 1 23 308 331 308 331 0.97

4 10 0.055 5.3 8.2 3.4 1 21 337 357 337 359 0.95

5 10 9.8e-05 0.0095 16.9 0.8 1 23 388 410 388 410 0.98

6 10 0.00045 0.044 14.8 4.0 1 23 417 440 417 440 0.97

7 10 0.1 9.7 7.4 2.4 2 23 447 468 446 468 0.93

8 10 6.7e-05 0.0065 17.4 0.6 1 23 474 496 474 496 0.99

9 10 0.00036 0.035 15.1 7.0 1 23 502 525 502 525 0.95

10 10 3.1e-05 0.003 18.4 4.4 1 23 539 561 539 561 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00044	0.042	14.8	2.0	3	23	254	274	253	274	0.97
2	10	4.3e-05	0.0042	18.0	2.9	1	23	280	302	280	302	0.98
3	10	0.00024	0.023	15.7	0.8	1	23	308	331	308	331	0.97
4	10	0.055	5.3	8.2	3.4	1	21	337	357	337	359	0.95
5	10	9.8e-05	0.0095	16.9	0.8	1	23	388	410	388	410	0.98
6	10	0.00045	0.044	14.8	4.0	1	23	417	440	417	440	0.97
7	10	0.1	9.7	7.4	2.4	2	23	447	468	446	468	0.93
8	10	6.7e-05	0.0065	17.4	0.6	1	23	474	496	474	496	0.99
9	10	0.00036	0.035	15.1	7.0	1	23	502	525	502	525	0.95
10	10	3.1e-05	0.003	18.4	4.4	1	23	539	561	539	561	0.98

Sequence Information

Coding Sequence: atgtttggtTATAGGCATTTAATTAACAAGACTTCAACCATGTCTGAAAACGAAGGAACAACtattgtatTAGATGGTGGATCATCTGCAAATACTATGACTATTGATGCGGCTCACATAAAGTTGGAGGCTTCAACCTCTGGCACTGAAAATATAActgatatacaaaattatttggattcatttaataaagaaattgaAGGAAATGAAGTAACACAAGTACAAACtgatGGGGACTCAGTAGAAcatgcatattttattgatcaaaatttccaatattattatcaaacaacTACAGGAGATGGCCAGATGGTTATGGTTGgaggactTTCAGAACAAGATGCACAAATGATGGCTGagacaaatgaaaataatatggataatgTTACTCAAATTGTTCTGCCTAATGtacaagataaaattaaaaaagatatccctcaaaTTGTTGCTTTAGCAGATGGTAGTGGGTATCAAACAGTAACTCTAGTTCAAGCTGATGCTGAAGCCAACAATTATGTACTTTATGTAGTCAaacaaaatgacaaaaatgatgAAACTCCAAATGTTATGGAGATGTCACAAGAAGAACATGATCCAGATAATCCTAATGTTAGTaatgtatatgattttaatgatGCAGAAGATCCAACAATACCAAAAAAACAGGAAATAGAAgatTCAGGTGAAGAAGAtgacaaatctaaaatagttaaaCTAGTACCTAAAAAGTCACAAACAGTAACTCAAgcacataatatgtgtaattattgCAATTACACTACTGGAAAAAGGTATTTATTGTCTCGTCATATGAAGTCTCATTCTAAAGAACGTCCACATAAATGTACTGTTTGTGAACGTGATTTCAAAACTCTAACTTCTTTGCAAAATCATGTGAATACTCATAGTGGAACAAAACCATATCAATGTCGAAGTTGTCCAAGTGCTTTTACTACATCAGgagAACTTAGTAGACATGTTCGGTATAAACATACTCAGGAAAAACCAcataaatgtacaatatgtgATTATGCTAGTGTAGAACTTAGCAAAATGAGAAATCATATGAGATGTCACACTGGTGAAAGACCATACcaatatccaCATTGTACTTATGCAAGTCcagatacatttaaattaaagcaCACTGGTGAGAAGCCATATGAATGTGATATCTGCTTTTCTAGGTTTACCCAATCCAACAGTTTAAAAGCACACAGATTAATCCATagtgGTGAAAAGCCTGTATTTAAATGTGACCACTGTCCTACTACTTGTGGGCGTAAAACTGATTTACGTATACATGTACAAAAGCTTCATACTTCTGATAAACCTATTAAGTGCAAACGATGTGGTGATGCATTTCCTGATCGTTACCAGTACAAGGTTCACTGTAAATCACACGAAGgggaaaaatgttataaatgtgAACTGTGTCCCTATGCTTCCATTTCTCAGCGTCATCTTGAAACTCATATGTTAATACATACAGATGAAAAACCATTCCATTGTAAACTATGTGATCAGtcATTCagacaaaaacaattattacgcCGCCATCATAATTTGTATCATAATCCAGCATATATACCACCTCCACCACATGCTAAAACTCATCAGTGTAATACATGTCAACGATTATTTACACATAAAGGAAATTTATTAAGACATATGGAAGTTCATATGCAAGAATCAACTGGAAATGATCGAAATACAGCAATAAAACAAAGATTagagTATACAGATTCAGCTAATGAGGATGAATCTGAGGAAGACACAAGTATTCCAACAAGTGAAACTGGAGTTGTAGCGGTAAAAAGTGAAGACGGACAGCAATATGTTGTGCTTGAAATGATTCAACTTGATGGTCAAGATCAGACAGCCTCAAGTGTATCATTACAGCAAGTTGACCAATCTtcttcGCCAAGTCAAAAAGaccttacaattttaaaaaccgcATCTTTATCAGACGTAAAAGAAGAATGTGGTGATGGTGTTGAAAATTGTTTTGGTTTTGATGATGAAGATGATGAAGAAACAACAAACTCAGGtggttaa
Protein Sequence: MFGYRHLINKTSTMSENEGTTIVLDGGSSANTMTIDAAHIKLEASTSGTENITDIQNYLDSFNKEIEGNEVTQVQTDGDSVEHAYFIDQNFQYYYQTTTGDGQMVMVGGLSEQDAQMMAETNENNMDNVTQIVLPNVQDKIKKDIPQIVALADGSGYQTVTLVQADAEANNYVLYVVKQNDKNDETPNVMEMSQEEHDPDNPNVSNVYDFNDAEDPTIPKKQEIEDSGEEDDKSKIVKLVPKKSQTVTQAHNMCNYCNYTTGKRYLLSRHMKSHSKERPHKCTVCERDFKTLTSLQNHVNTHSGTKPYQCRSCPSAFTTSGELSRHVRYKHTQEKPHKCTICDYASVELSKMRNHMRCHTGERPYQYPHCTYASPDTFKLKHTGEKPYECDICFSRFTQSNSLKAHRLIHSGEKPVFKCDHCPTTCGRKTDLRIHVQKLHTSDKPIKCKRCGDAFPDRYQYKVHCKSHEGEKCYKCELCPYASISQRHLETHMLIHTDEKPFHCKLCDQSFRQKQLLRRHHNLYHNPAYIPPPPHAKTHQCNTCQRLFTHKGNLLRHMEVHMQESTGNDRNTAIKQRLEYTDSANEDESEEDTSIPTSETGVVAVKSEDGQQYVVLEMIQLDGQDQTASSVSLQQVDQSSSPSQKDLTILKTASLSDVKEECGDGVENCFGFDDEDDEETTNSGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00184818;
90% Identity: iTF_01329223;
80% Identity: -