Sgrm012971.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- -
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001340.1:1407424-1408209[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-13 3.4e-09 37.0 17.8 2 47 84 129 83 129 0.90
Sequence Information
- Coding Sequence
- ATGAACGCGACGACCACGTCCGGCCGGAAGCGCACTCGTGCCGCGACCGACCACTCTGACGCTGATAGAAATACCCACGAAACAGACAGAAATTATATACGCCCACGCGTTTCAGATCCTTACCCCGAAATGCCGGCCAGCAGACATCATCATCACCACCatcaacaacagcagcagcagcagcacgTTCAGGTGGTCACTTCCACGGCGGCGGTGGTGCAGGCGGCGCAACAGTCCGTCAAGGAGAAACAACGGTTGTGCACCAACTGCAAGAATCACGGGCTCCGCAAGGTGTGGAAGAAGCACAAGCGGTACTGCAAGTACCGGGACTGCCCTTGTCCCAAGTGTATGAAGACGGCGGCGACGCGCAAGAACTGCGCCGAGCAGACCGCCAAGCGACGGGCCCGGCAGGAGGACGAGCAGCGCGAACAGGAGCTTCAGTTGAACCCGTCCAACTTCATGGACGAGCGTCCCGTGCCGTATCAGCCGGAAGCCACCACGCCTCAGTCCTGCAGCAGACGGAACATGAGCGAGTCTTCGCAGGTAGCCCGGTCATCCACGCCCAAGGGGACGATGTCTCCCAGGACGTCCGATTTCGACGACAACAGTTCGTCCATAGACATCGTCAACGGCCGCGATGGCGTTCTCGGTGAATGCATAATTGTGGACAGCAGGGACGATACCGTTGACGATCGCGGTAGTCATCTGGCCGACGACGTAGACAAAAAAGACATCGACGCAGGTAAGCAACAGTTATGCGTACGCGcgaagtattattattgttga
- Protein Sequence
- MNATTTSGRKRTRAATDHSDADRNTHETDRNYIRPRVSDPYPEMPASRHHHHHHQQQQQQQHVQVVTSTAAVVQAAQQSVKEKQRLCTNCKNHGLRKVWKKHKRYCKYRDCPCPKCMKTAATRKNCAEQTAKRRARQEDEQREQELQLNPSNFMDERPVPYQPEATTPQSCSRRNMSESSQVARSSTPKGTMSPRTSDFDDNSSSIDIVNGRDGVLGECIIVDSRDDTVDDRGSHLADDVDKKDIDAGKQQLCVRAKYYYC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01304881;
- 90% Identity
- iTF_01304881;
- 80% Identity
- -