Sgrm012205.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- -
- Assembly
- GCA_003264975.1
- Location
- QEWZ01000032.1:326474-330379[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.32 4.7e+02 1.5 0.0 3 17 60 74 58 79 0.88 2 3 0.00027 0.39 11.4 0.1 25 45 99 120 96 121 0.92 3 3 0.00096 1.4 9.6 0.2 26 44 220 239 179 241 0.64
Sequence Information
- Coding Sequence
- ATGGAGACGTATTACGTGTGCAATGGAAATCTAATTAAACGAGACACTGaaattgATTCTAAAGATATATTTGTCATTGAAGAACCATTTGAAacatatgacaataatattattcaagatGAATCGCCACAACTTGAAGCTGATATTCTTGAAGAATctcgaAAAAGAAATTGTCGAGAATGGAGTCAATATGAAACAAAGATTCTTTTGGATATGTTTAGACGAAATGTTACTCAAGTAGGAccgatgaaaaaatttaaaagtaaacgaGAAATGTTCAAATGTATAGCACAAACAATATCTACTAAATTAAACATCACCAGAAGTGCTCATCAATGtgaaaatagGTATAAAACTGTAGTAAATCAACGAAAAGTTGGTTGTTCAATATTACAAAAGTCTGTATCAAATATCgaaaagaaattaaatgaagAAGAAAGATCTCAAAATGATGTATCAGCTTCAGTGTCAGCAGATCATGATTATAATGGACAAAATTCTGGAACTAATGgtCAATGCACTATGAAATCTTTGAATGAATGGGGTGTTGATGATACTAAGCTTCTAATGGAATTGTACAGAAAGAACATTTCCAAAGTAGGACTGGAAAGAACATTCAggactaaattaaaaatgttcgaaTATATAGCAGAtaccattaataatattctaaatatcaCAAGAACTGCTGAGCAATgtctaaatagatACAAAACCatatttagaagaaaaaattttaaacagaatAGATTAAACAATGATATGTCCATAAAAAACATAGTTATagaagataatttaaataacagtgATAATTCAAACTGTGATACACATTTTGTCGATGATTTGTATGAATCTGAATTTAACACTCATATTTATGATGGCAAAACATTAAGAAAGGCTGTTAAGCAGCCAAAGATGGTTCCTAAACTATTACCCAAAGAGCCTGATACTAGTCAGGATACAGTGTTGACAAGAACTCTGAGGGAGATTGCCAACCAAAAAGAAAAGACACTATTAAAAATTGCAGCAAACCAAGAACGTGCAGAAGAACGAAGGCATCAAGAAACTTTGACACTTATCCGACAActtggtgAAACTATTGTTCGATACATTGGAAATCAACAAGGTGTTACATCTGAACagcattattaa
- Protein Sequence
- METYYVCNGNLIKRDTEIDSKDIFVIEEPFETYDNNIIQDESPQLEADILEESRKRNCREWSQYETKILLDMFRRNVTQVGPMKKFKSKREMFKCIAQTISTKLNITRSAHQCENRYKTVVNQRKVGCSILQKSVSNIEKKLNEEERSQNDVSASVSADHDYNGQNSGTNGQCTMKSLNEWGVDDTKLLMELYRKNISKVGLERTFRTKLKMFEYIADTINNILNITRTAEQCLNRYKTIFRRKNFKQNRLNNDMSIKNIVIEDNLNNSDNSNCDTHFVDDLYESEFNTHIYDGKTLRKAVKQPKMVPKLLPKEPDTSQDTVLTRTLREIANQKEKTLLKIAANQERAEERRHQETLTLIRQLGETIVRYIGNQQGVTSEQHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01305495; iTF_01304121; iTF_00972990; iTF_01167552; iTF_00134216; iTF_00135259; iTF_00136074; iTF_01304799; iTF_00940430; iTF_01350210; iTF_00018971;
- 90% Identity
- iTF_01304121;
- 80% Identity
- -