Rnym018027.1
Basic Information
- Insect
- Rhopalosiphum nymphaeae
- Gene Symbol
- -
- Assembly
- GCA_036289425.1
- Location
- JAZAQC010000025.1:3711995-3715161[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.43 4.6e+02 1.5 0.0 3 17 60 74 58 79 0.88 2 3 0.00036 0.38 11.4 0.1 25 45 99 120 96 121 0.92 3 3 0.0013 1.4 9.6 0.2 26 44 220 239 179 241 0.64
Sequence Information
- Coding Sequence
- ATGGAGACGTACTACGTTTGCAATGGAAATCTAGTTAAACGAGACACTGAActtgattCTAAAGATATATTTGTCATTGAAGAACCATTTGAAAcatatgacaataatattattcaagatGAACCGCCACGACTTGAAGCTGATATTCTTGAAGAATctcgaAAAAGAAATTGTCGAGAATGGAGTCAATATGAAACAAAGATTCTTTTGGATATGTTTAGACGAAATGTTACTCAAGTTGGAccgatgaaaaaatttaaaagtaaacgaGAAATGTTCAAATGTATAGCACAAACAATATCTACTAAATTAAACATCACTAGAAGTGCTCATCAATGtgaaaatagatataaaacaGTAGTAAATCAACGAAAAGTTGGATGttcaatattacaaaaatctaGATCAAATGTcgaaaagaaattaaatgaaGAAGAAAGATCTCAAAATGATGTATCAGCTTCAGTGTCAGCAGATCATGATTATAATGGACAAAACTCTGGAACCAATGgtCAATGCACTATGAAATCTTTGAATGAATGGGGTGTTGATGATACTAAGCTTCTAATGGAATTGTACAGAAAGAACATTTCCAAAGTTGGACTGGAAAGAACATTCAggactaaattaaaaatgttcgaGTATATAGCagatactattaataatatactaaatatcacAAGAACTGCTGAGCAATGTCTAAATAGatataaaaccatatttagaagaaaaaaatttagacaGAATAGATTTAACAATGATATGTCCATTAATAACATAGTTATagaagataatttaaataacagtgataattCAAACTGTGATACACATTTTGTTGATGATTTGTATGAATCTGAATTTAACACTCAAATTTACGACGGCAAAACAAAAAAGGTTGTTAAGCAACCAAAAATAGTTCCTAAACTATTACCCAAAGAGCCTGATACTAGTCAGGATACAGTATTGACAAGGACTCTGAGAGAAATTGCCAATCAAAAAGAAAAGACGCTATTAAAAATTGCAGCAAACCAAGAGCGTGCAGAAGAACGAAGGCATCAAGAAACTTTGACACTTATCCGACAACttggtgAAACTATTGTTCGATACATTGGAAATCAACAAGGTGTTACATCTGAACagcattattga
- Protein Sequence
- METYYVCNGNLVKRDTELDSKDIFVIEEPFETYDNNIIQDEPPRLEADILEESRKRNCREWSQYETKILLDMFRRNVTQVGPMKKFKSKREMFKCIAQTISTKLNITRSAHQCENRYKTVVNQRKVGCSILQKSRSNVEKKLNEEERSQNDVSASVSADHDYNGQNSGTNGQCTMKSLNEWGVDDTKLLMELYRKNISKVGLERTFRTKLKMFEYIADTINNILNITRTAEQCLNRYKTIFRRKKFRQNRFNNDMSINNIVIEDNLNNSDNSNCDTHFVDDLYESEFNTQIYDGKTKKVVKQPKIVPKLLPKEPDTSQDTVLTRTLREIANQKEKTLLKIAANQERAEERRHQETLTLIRQLGETIVRYIGNQQGVTSEQHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01328577;
- 90% Identity
- iTF_01304121;
- 80% Identity
- -