Sgrm017917.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- Dnajc1
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001385.1:45556-51888[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00045 0.66 10.7 0.0 2 31 289 322 288 330 0.87 2 2 1.9e-09 2.8e-06 27.9 0.4 2 43 373 419 372 421 0.88
Sequence Information
- Coding Sequence
- aTGACCGGTTCAAAAATGTTAGCTTTAATTTTAGTTGTGTTGGCATTCAACACAGTATCAACTCAAGCATGGGATTCTGATCAAATGGAGGTTTTTGATCTGGTTGAAGAaatgaataatatcaatttttatcaatttttagaaGTACCTGAAgatGCTAATTCATCAGCAATACGACATGCATTTAGAAGGATGTCATTAATATTACATCCCGATAAAAACGACTCTCCAGATGCAGAAGCTAGATTCAGGGAATTAGCATCAATTCATGATGTTTTACGGGACCCTGTAAAACGTGGTCATTATGACAAAGTTTTAAGTGAAGGGTTACCAGATTGGCATCACGCTGTTTATTACTATAGAAGAGTTAGAAGAATGGGTTTCCTAGAAATGATTGTTATTCTCTTTTCTATTATAAGTGTTGGACAATATCTTGTGGCTTGGGGAtcatatattgaaaataaattcactGTAGAAGAGTTATtgagttcaaaaattaaaaaaattcgaaaacaaAAGAAATATCGAGGCGATTCAACATTACCTCCAGAATTTGATGTTAACATACCAAAACCTAGtttaaaaaatacacttCCATGTCAATTACCTTATTGGTTATggatatttatcttaaaatcaCCTTCACTTACAACCTCAGCCATATCATTTTTGGTCACAAAATTCaaagaaagaaaaaacaacCAAAAAATGGATTTTGAAAAACCAGAACCAGTCATACGTGAAAGAATAAGACGTCGTAAAACACCGTATAAGATACctgaaattaatgattataaaaacacTAATGGAGATACGCAAGGAAAAgttaatactgaaaaaaatgaTACTCCAGCAGTTGCTGGTGGTCTATGGACTGATGAAGATTTATACGAATTGTCACAGATGGTAAATAAATTTCCCCCTGGTACATCAGATAGGTGGCAAAAGGTCGGCAAAGCAATGCAACGTCCTGTTCCTGAAGTTGCATACATGGctaataaaatgaaacaaaatggATATAAGGTGCCAACTCCTGGAGAAACAATCGAGCCAGTTATCACTGAAGAACcgaaaaaagttaaaacaagaGCAACAGAAAACGCTGAGTCAAGTGATAATTCATGGACTCAAATTCAACAGAAAACATTGGAAAATGCTCTTATTAAGTTTCCTAAAGGGTCTACTGAAAACCGCTGGGAAAAGATATCTAAATGTGTACCAAATAAAACTAAAGAAGAATGTATGGCGAGATATAAAGAATTAAGTCAACaagtgaaaaagaaaaaagattcAATTGATGATGGAGTAGAAAATGTTGAAAACGACACTAATGAATCgtga
- Protein Sequence
- MTGSKMLALILVVLAFNTVSTQAWDSDQMEVFDLVEEMNNINFYQFLEVPEDANSSAIRHAFRRMSLILHPDKNDSPDAEARFRELASIHDVLRDPVKRGHYDKVLSEGLPDWHHAVYYYRRVRRMGFLEMIVILFSIISVGQYLVAWGSYIENKFTVEELLSSKIKKIRKQKKYRGDSTLPPEFDVNIPKPSLKNTLPCQLPYWLWIFILKSPSLTTSAISFLVTKFKERKNNQKMDFEKPEPVIRERIRRRKTPYKIPEINDYKNTNGDTQGKVNTEKNDTPAVAGGLWTDEDLYELSQMVNKFPPGTSDRWQKVGKAMQRPVPEVAYMANKMKQNGYKVPTPGETIEPVITEEPKKVKTRATENAESSDNSWTQIQQKTLENALIKFPKGSTENRWEKISKCVPNKTKEECMARYKELSQQVKKKKDSIDDGVENVENDTNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01032822;
- 90% Identity
- iTF_01032822; iTF_01031907; iTF_00136070; iTF_00184522; iTF_00018958; iTF_00463280; iTF_01305488; iTF_01304113; iTF_00972981; iTF_01167541; iTF_01304790; iTF_00135255; iTF_00134205; iTF_00940413;
- 80% Identity
- -