Rmai006965.1
Basic Information
- Insect
- Rhopalosiphum maidis
- Gene Symbol
- Dnajc1
- Assembly
- GCA_003676215.3
- Location
- NC:39740182-39746237[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00043 0.3 10.7 0.0 2 31 290 323 289 331 0.87 2 2 1.8e-09 1.2e-06 27.9 0.4 2 43 374 420 373 422 0.88
Sequence Information
- Coding Sequence
- ATGACCGgttcaaaaatgttagctttaattttagttgtgTTGGCACTCAACACAGGATCAATTCAAGCATGGGATTCTGATCAAATGGAGGTTTTTGATCTGGTTGAAGAGatgaataatatcaatttttatcaatttttagaaGTACCTGAAgatGCTAACTCATCAGCAATACGACATGCATTTAGAAGGATGTCATTGATATTACATCCCGATAAAAACGACTCTCCAGATGCAGAAGCCAGATTCAGAGAATTAGCATCAATTCACGATGTTTTACGAGACCCTGTAAAACGTGGTCATTATGACAAAGTTTTAAGTGAAGGGTTACCGGATTGGCATCATGCTGTTTATTACTATAGAAGAGTTAGAAGAATGGGTTTCTTAGAAATGATTGTTATTCTCTTTTCTATTATAAGTGTTGGACAATATCTTGTGGCTTGGGGatcatatattgaaaataaattcactGTGGAAGAGTTATTgagttcaaaaattaaaaaaattcgaaagcAAAAGAAGTATCGAGGCGATTCAACATTACCGCCGGAATTTGATGTCAACATACCAAAACCTAGtttaaaaaatacacttcCATGTCAATTACCTTATTGGTTATggatatttatcttaaaatcaCCTTCACTTACAACCTCAGCCATATCATTTTTAGTCACAAAATtcaaagaaagaaaaaacaaccaaaaaaaagtGGATTTTGAAAAACCAGAACCAGTTATACGTGAAAGAATAAGACGTCGTAAAACGCCGTATAAGATACctgaaattaatgattataaaaacactAATGGAGATACGAATGGAAAAGttaatactgaaaaaaatgatactcCAGCAGTTGCTGGTGGTCTATGGACTGACGAAGATTTATACGAATTGTCACAGATGGTAAATAAGTTTCCCCCGGGTACATCAGATAGGTGGCAAAAGGTCGGCAAAGCAATGCAACGTCCTGTTCCTGAAGTTGCATATATGGctaataaaatgaaacaaaatggATATAAGGTGCCAACCCCTGGAGAAACTATCGACCCAGTTATCACTGAAGAACCAAAGAAAGTTAAAACAAGAGCAACAGAAAATGCTGAGTCAAGTGACAATTCATGGACTCAAATTCAACAGAAAACATTGGAAAATGCTCTTATTAAGTTTCCTAAAGGGTCTACTGAAAACCGCTGGGAAAAGATATCTAAATGTGTACCAAATAAAACTAAAGAAGAATGTATGGCGAGATATAAAGAATTAAGTCAACaagtgaaaaagaaaaaagattcAATTGACGATGGTGtagaaaatgttgaaaatgacACTAATGAATCgtga
- Protein Sequence
- MTGSKMLALILVVLALNTGSIQAWDSDQMEVFDLVEEMNNINFYQFLEVPEDANSSAIRHAFRRMSLILHPDKNDSPDAEARFRELASIHDVLRDPVKRGHYDKVLSEGLPDWHHAVYYYRRVRRMGFLEMIVILFSIISVGQYLVAWGSYIENKFTVEELLSSKIKKIRKQKKYRGDSTLPPEFDVNIPKPSLKNTLPCQLPYWLWIFILKSPSLTTSAISFLVTKFKERKNNQKKVDFEKPEPVIRERIRRRKTPYKIPEINDYKNTNGDTNGKVNTEKNDTPAVAGGLWTDEDLYELSQMVNKFPPGTSDRWQKVGKAMQRPVPEVAYMANKMKQNGYKVPTPGETIDPVITEEPKKVKTRATENAESSDNSWTQIQQKTLENALIKFPKGSTENRWEKISKCVPNKTKEECMARYKELSQQVKKKKDSIDDGVENVENDTNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01032822;
- 90% Identity
- iTF_01328568;
- 80% Identity
- -