Sgrm016640.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- -
- Assembly
- GCA_003264975.1
- Location
- QEWZ01000817.1:9176-9874[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-07 0.001 19.7 0.1 14 43 13 42 9 45 0.91 2 3 7.8e-05 0.34 11.6 0.2 18 45 45 72 41 83 0.85 3 3 2.6 1.1e+04 -2.9 0.1 36 43 179 186 175 196 0.53
Sequence Information
- Coding Sequence
- ATGGCAGCTATTTTGTCTGTCCAAACAACTCAAACTGAACAATTTGATGAGTTACGTAATTCGATTAAATCGTTGACTTCTGATATTATTGCCTTAAAATCAGAAAATGCTGTGCTACGCTCTGAGCTTGTGTCTCTTAAAGCTAAAGTAAGTGACCTTGAAAGTAATACTACTAAATATAGGTATGAAAACACGGTGGTCCAAATGTTACGTGAATCCAATGAGCGCAGTAGATGCAACCATAATATTCTTGTTTTTGGTATAACCGAGTCCATTGCTGATAATGGGGTTCAAAGGGCATTAGATGACAAGATTAATCTTACTAACTTGTTAAGTAGTCTTTCACTGCAGTTATcttctaatataaaattgattagaCTTGGTTCAAACACAGCAAAGAAACCAAGGCCGTTAAAAGTGTGTTTTCATTCAAAGAAAGAGGTTGATGACATGCTTTCAAGTTATGTCAATGCATTACACAATGGTCTCCAAATTCCTACCAACTTCCGCATATCAAGGGATAGGACTTCGTTGGAACGTAATATTCTGCGTGCGGCCTATACTGAACTTAACCAGAGAAGAGAAGCGGGTGAATTGAACATTAAGGTCTCATTCATTAACGGTGTTCCATCTGTGGTCAAATTCAATCCAAAAAACTGGGTCCGTGGAAACAATATCAACCGACAACCAACGATTTAG
- Protein Sequence
- MAAILSVQTTQTEQFDELRNSIKSLTSDIIALKSENAVLRSELVSLKAKVSDLESNTTKYRYENTVVQMLRESNERSRCNHNILVFGITESIADNGVQRALDDKINLTNLLSSLSLQLSSNIKLIRLGSNTAKKPRPLKVCFHSKKEVDDMLSSYVNALHNGLQIPTNFRISRDRTSLERNILRAAYTELNQRREAGELNIKVSFINGVPSVVKFNPKNWVRGNNINRQPTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00134001;
- 90% Identity
- iTF_01328369;
- 80% Identity
- iTF_01328371;