Basic Information

Insect: Scaptomyza tumidula
Gene Symbol: stc
Assembly: GCA_035044465.1
Location: JAWNNW010000506.1:2781758-2785251[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 1.3e+04 -3.7 0.5 15 18 375 378 374 379 0.79

2 14 2 1.8e+04 -4.1 1.6 15 19 402 406 401 406 0.81

3 14 0.057 5e+02 0.8 2.0 4 11 435 442 434 443 0.90

4 14 5.9e-07 0.0052 16.7 15.1 1 19 447 464 447 464 0.93

5 14 1.5 1.3e+04 -3.7 1.1 6 10 490 494 489 494 0.89

6 14 4.4e-08 0.00039 20.4 13.8 1 18 500 517 500 518 0.98

7 14 2 1.8e+04 -6.3 3.9 7 13 522 528 522 529 0.74

8 14 2e-09 1.8e-05 24.6 12.9 1 19 558 576 558 576 0.98

9 14 2.4e-05 0.21 11.6 17.0 4 19 624 639 617 639 0.88

10 14 0.06 5.2e+02 0.8 11.6 1 11 679 689 679 701 0.79

11 14 4.8e-10 4.2e-06 26.6 15.5 1 18 706 723 706 724 0.97

12 14 2 1.8e+04 -6.7 8.5 9 18 770 780 760 781 0.73

13 14 5.2e-09 4.5e-05 23.3 10.9 1 16 817 832 817 835 0.96

14 14 5.2e-07 0.0046 16.9 13.1 1 19 850 869 850 869 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	1.3e+04	-3.7	0.5	15	18	375	378	374	379	0.79
2	14	2	1.8e+04	-4.1	1.6	15	19	402	406	401	406	0.81
3	14	0.057	5e+02	0.8	2.0	4	11	435	442	434	443	0.90
4	14	5.9e-07	0.0052	16.7	15.1	1	19	447	464	447	464	0.93
5	14	1.5	1.3e+04	-3.7	1.1	6	10	490	494	489	494	0.89
6	14	4.4e-08	0.00039	20.4	13.8	1	18	500	517	500	518	0.98
7	14	2	1.8e+04	-6.3	3.9	7	13	522	528	522	529	0.74
8	14	2e-09	1.8e-05	24.6	12.9	1	19	558	576	558	576	0.98
9	14	2.4e-05	0.21	11.6	17.0	4	19	624	639	617	639	0.88
10	14	0.06	5.2e+02	0.8	11.6	1	11	679	689	679	701	0.79
11	14	4.8e-10	4.2e-06	26.6	15.5	1	18	706	723	706	724	0.97
12	14	2	1.8e+04	-6.7	8.5	9	18	770	780	760	781	0.73
13	14	5.2e-09	4.5e-05	23.3	10.9	1	16	817	832	817	835	0.96
14	14	5.2e-07	0.0046	16.9	13.1	1	19	850	869	850	869	0.96

Sequence Information

Coding Sequence: ATGGCCGAAtattggcagcaacaacaacatcagcagcagttgacacctcagcagcagcaacttacTAATGGAGCTGCAGCGCATAATGACTCAGTTGCTGACGCTAACTCCGGCGCTGCCTGCAATGGCACCCCTACTGgccacaccaacaacaacaactatgttAACTTCAATCAGTTTATCACGCAACATAATTTACACAGCTCCAACCTCAACTACAACattggcggcggtggcggcgccTTTGGCCTGACGCCCAACacaagcagcaccagcagcaacggcagcgcTGCCAACAGCGCCAGCAACTCTGGTCTTAACTCGTCCAGCTTTGGTGTAACACAATATGTGCAACCTTTATTTGGCTATCAGAATGGCGATGCCGGCCAGCATTATCAGGGAGGCGGAGGAGGagttgccgccgctgctgctgcctatcCCAATTTGTACTCAACTTTTGGCAATAATCCATTTGCTGCTGCACCTGCTGGCGGCTTCGATTTTAGTGCTTCTAAGCTGCAGGCGAGCGCACCCGAATTTGTGCCCAATTTTGCCAAACTCAGCCTGTCGACGACCAATAaagcgaacagcaacaacaacaataacaacaacactgccaCACAACCTGAGACTTTGGCCCATGagcagccagcaacagcagtcagcagcaacaatccacagcaacaacggcaaccgAAACCGTTGATGGCCGGCAGCAACACtggcaacagcggcagcagtcgccagcagcagcgtcgCCAAGATTATCGCGACGATCGACATGAGGATCGATATGAGCGCGCAAAAAAGCCGCAGAAGCAACAACGCTACGACAATCATCGCAGCAACAAACGACGCGACGACTGGAATCGCAATCGTGATCGCATCAATGGTTATCCACGTGCCGCCGACGAACTGGACACCAGCAATAGCAATGACAGTGCTCAAACCTCACCCGAAAAGcaaccgcagcaacaacaacaacaacaaatctcgCCACGACGTGCACCGGATAATGAGAAGCTATCACAGCGTGAGAAGCTAATGCGTGACATCGAGCAGCGACGTCTGGAgtgtttggtgtgtgtggAACAGATAAAGGCACATCATGGCACCTGGTCATGCCAGAACTGCTATCATGTGCTGCATCTCAAATGCACCATTACGTGGGCAAGTAGCTCGAAGTCTGCAGAGGGTTGGCGTTGTCCCGCCTGCCAGAACGTGCTGGAGGAGGTGCCACGTGAATATAATTGCTTTTGTGGCAAACTCAAGAATCCACCATTAACACGCAATGAGCTTGCACACAGCTGCGGTGAACTGTGCTGTCGCGTGGAAGGATGCAGTCATGCTTGCACGCTGCTGTGTCATCCGGGTCCGTGTCCGCCATGCCAGGCGAATGTGAGTCGCAGTTGCGGCTGTGGACGCACCTCCAAAATGTTGCAGTGTGCCAtgaaacagcagctgcaatgcGAGTCCATCTGCGATAAGACGCTCAATTGCAGCGAGCATCGGTGCCAGCAGCTGTGTCATGCGGGCAAATGTGAGCCATGTGGCGAGCAGGTGGAGCAACACTGCCACTGTGGCAAGCAGCAGCGCGAAGTGTTGTGCACCAAGGAGAGTCAGGATAAGCGCAGTTACTCGTGCAAGGAGTGCTGCAGCAAACCGTTACCCTGCGGCAATCACAAGTGCAAGGACTCGTGTCATGCCGGCGCTTGTCGTCCCTGCAAGCTGAGTCCACAGCAAATCACCAGCTGCCCCTGCGGCAAGCTGCCTGTGCCGAACACGCAACGCGCCAGCTGCCTCGATCCAGTGCCCACCTGCGATGGTGTCTGCAGCAAGACATTGCGCTGCGGCAAACCCGCCCATCCGCATCAATGCGCCAGCAAATGCCATTTGGGCCAGTGTCCACCCTGTCCCAAGCAGACGGCTGTCAAATGCCGTTGCGGTCACATGGATCAGCTGATCAAGTGCCGGCAGCTATCAACACGCGCGGATGATGCGCGTTGCAAGCGTCGTTGCACAAAGAAACGCAGCTGtggcaaacacaaatgcaatgcGGAATGTTGCATCGATATCGATCATGCCTGCCCGCTGCCCTGTAATCGAACACTGAGCTGTGGCAAACACAAATGCGATCAGCCGTGTCATCGCGGCAATTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGTGGAGCAGAGGTTATCTATCCACCTGTGCCGTGTGGCACCAAGCGTCCACCCTGCAAGCGCCAATGTTCGCGCACCCACGGCTGTGAGCATGTGCCACAGCACAGTTGCCATGCGGCGGCTGTCTGCCCGCCCTGCATGATGTTCACAACGAAGTGGTGTCATGGCAATCATGAGCAACGCAAAACGATACCCTGCTCCCAAGAGAGTTTCAGCTGTGGCTTTGCGTGCGGCAAGCCGTTAGCCTGCGGTCGCCACAAATGCATTCGACCCTGTCACGAGGGCGATTGTCCGCAGCAGCCAGGCGATTTGTGCCGCCAGAGCTGCGCCAAGCCGCGTTTGCTATGCGGCCACAAgtgtgctgctgcttgtcATGAGGGCGCCTGTCCGGAGACTCCGTGCAAGGAGCTTGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAGCAGAGCCGCAGCTGCCAGGAGCTTGCACGGGAGCATAGTCGCATTGCGACCGCACAGCTGGCCTCCTCCATGGCGGAGATGTCGCGCGGCAACTATATGGAACTCAGCGAAATACTTGCacccaccaaaaacaacaaatccaaTAAAACcTTGGACTGCAATGATGAGTGTCGTCTGTTGGAACGCAATCGTCGCTTGGCTATTGGACTGCAATCGCGAAATCCGGAATCGCAGCTTAAATCGCTGACAAAATATTCGGAATTTATGCGCGGCTTTGCCAAGCGTAATCCGGCTCTAACCAAGAGTGTCTATGAAACACTAACCGATTTGGTCAAACTGGCCAAAGAGAGCAAGCAAAAGTCACGCAGTCATTCTTTTCCCACAATGAATCGCGAAAAGCGTCAAATGGTGCACGAGCTGTGCGAAGTGTTTGGTGTGGAGTCCGTATCCTATGACAAGGAGCCCAATCGCAATGTAGTCGCCACAGCGCACAAGGAACGCTGCTGGTTGCCCGCCACAAGCGTTATGGAGGTTCTTGCACGTGAATCCGGTCAGCGTCGCGTCCCGGTGCCCAGTAACAATGCCTGGGGCCTCAAAAAGTAG
Protein Sequence: MAEYWQQQQHQQQLTPQQQQLTNGAAAHNDSVADANSGAACNGTPTGHTNNNNYVNFNQFITQHNLHSSNLNYNIGGGGGAFGLTPNTSSTSSNGSAANSASNSGLNSSSFGVTQYVQPLFGYQNGDAGQHYQGGGGGVAAAAAAYPNLYSTFGNNPFAAAPAGGFDFSASKLQASAPEFVPNFAKLSLSTTNKANSNNNNNNNTATQPETLAHEQPATAVSSNNPQQQRQPKPLMAGSNTGNSGSSRQQQRRQDYRDDRHEDRYERAKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRAADELDTSNSNDSAQTSPEKQPQQQQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEEVPREYNCFCGKLKNPPLTRNELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKMLQCAMKQQLQCESICDKTLNCSEHRCQQLCHAGKCEPCGEQVEQHCHCGKQQREVLCTKESQDKRSYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPQQITSCPCGKLPVPNTQRASCLDPVPTCDGVCSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKRPPCKRQCSRTHGCEHVPQHSCHAAAVCPPCMMFTTKWCHGNHEQRKTIPCSQESFSCGFACGKPLACGRHKCIRPCHEGDCPQQPGDLCRQSCAKPRLLCGHKCAAACHEGACPETPCKELVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKNNKSNKTLDCNDECRLLERNRRLAIGLQSRNPESQLKSLTKYSEFMRGFAKRNPALTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSVMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_01321594;
80% Identity: -