Stum012066.1
Basic Information
- Insect
- Scaptomyza tumidula
- Gene Symbol
- CDC5
- Assembly
- GCA_035044465.1
- Location
- JAWNNW010000812.1:914859-917148[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-11 1.4e-08 34.7 0.0 1 40 228 268 228 272 0.93 2 4 0.00023 0.26 11.4 0.1 3 43 285 329 283 332 0.86 3 4 2.1e-07 0.00023 21.2 0.0 3 46 340 384 338 384 0.95 4 4 2.3e-11 2.5e-08 33.9 0.1 3 43 392 433 390 436 0.95
Sequence Information
- Coding Sequence
- ATGTGCGATCTGTCAAACGAAGCGCAGGATTACCAAAAACAGTTGCAGGAACTAGCAACGCTGCTATCTGCCACAGCTCACGGCGATGTGGACGCCCTTAAACTTAATCAGGCTCTTCAGCAGTACCTTGAACAGTTCCGTCAGCAGACGCTGAAACTGCTGCAGAAAGTGCAAACGCTTTATAAGCGTAACGAGGAGATACTAACTAACCGAATAAAGAAGCGCTCTGGCACTAATGAAGTCGTTGGAATGAGCGGCGCTGTACTCCGCGGCGGAACATTTCGTTTTAAGGgtaatttatattttcgtGATGCAGACGGACGCAGTTGTCCCAACAATGAGGACTACGAGCGAAGAAGCAGCTACGAAATGTTTCCCACCGACTTTGATATGCGCTCCAAGCACGTTTGGACGGTGCTGGATAAGAAAAACATTGTTATGGGTGTTAAGCAGCAGCTGTTGGAACAAGCCGCCTTCAGACCAAAATGCAGCTCAAAAGTCAGAGGACGCAAGCGCAAGGCCATCGATCTACACCAGCATTCGGTTGAAGAATTGCTAAGTGAAGCGGAACCCAAGTTTAGCATTGATTGGAATCAAATAAGCACACTAGACCTAGAATGTCGTCATTCAGCCTACAGTTGTGAGGCCATGTGGCTTGTGTATATGCAGCCGAAGATCAAGCGCGATGAATGGACAGCCGAAGAGGATCAAATTCTGGTGGCAGTTGCTCGAAAAAACAAGATGCAAAACTGGATAGCCATTGCGTCTAAAGTGGATGGGCGCACGGATTATCAGTGCTTTGTGCGCCTGCAGGCAGAGCTGCGCTACAAACTAGAGCCAACATATGCCAAGAAATGGTGCCATCAGGACAGCGAACGTTTGCGTGAACTTGTCTTGAAGAATACGTTAAACGGCGTTGTTAATTGGTCCCAAGTTGGCCAACATTTTCCAAACAGAGCGCGATCTACACTAATTGCACGCTATGTATACACACTGAGTCCCAATATCAGTCACGcACCCTTCACTGAGAAAGAGGATATATTGCTTTATGCTGCGGCTAAGGAATATGATGGCAAGTTCAATCGCTTTCCGCTCACGCTATTTCCCAATCGCTCTTTGGCCCAGCTGCGCACCCGCTATCAGAATGTACTGGCACAGCGTAACAAAACTGATTCCTGGTCTGTGAAGGATGACGAAAATCTAATGAAATTCATTTCTAAACACGGCACCTCGCAGTGGGTGAACTGTGCCAAACATTTGGGCAATCACACGCGCACCAGCTGTCGCACCCGCTTTTTAGTCATCAAGCGATTTCTGGAGAAGCATCCAAATGCAACAGAAGCTGATTTACCACGGCGCAAGTCCTGTAAAAACGATTTAGTAAACCCTGAAACTTGGGAGCTATGTTTACAAGAAATGCAATCAGATCCAGATGCAGAGTTTGTGAGCTCAGTGTCAAACGAATTGTTGGTGCACTCGCCAgcacacaataataacaacagcaagatTTCCTCAATTAAAGatgaaaattatgaaaactGGGACGTATGTTCACTGGACTCAAAAGCGGAAGAATTGCCGTCTCCAGTACGAAAGACAATGGGCACATTTGACAAAAGAGTATATGAGTATTTCATGTACGCCTATAATCTCAATCTACGATCGCCTGCGATGAAAATACCACTtccaaaaaatcaaaataatctACAAGGTATGGCTTCTGCACTATGTTTTCGGTTGACCAGTCGTAAGCGCATACTCATAAACAGCGCTTGCCTACCCAAGCAGCTTAATTTCTGCCATAACATAGCGCTCTGTCAATTGCCGCCGTCGGACGAAAGtaagacagcaacaaaattggtACCGCCAAACTGGTCCACCATGATGGGTTTTCGGGCCATGTGCATATTGTCAATGCGGCAACCCATTAACTTTAATGATGTATCGAATCCCGAAAATAGTTACCATGAATCTCAGCCAGAATTACAGCTGTTTCGACAACGTTTACGCACACTTTTCTACCGCACGACTCTATTGAGCCGCCTGGAGGTGGCGAATTTCAAGGAACTGCCGAATGTATTGATGAAACTGTCTGGTTCTATTGTAACTGACGACTTGGTTAACACTTCAGATTcagatgacgatgatgaagcatgtgaataa
- Protein Sequence
- MCDLSNEAQDYQKQLQELATLLSATAHGDVDALKLNQALQQYLEQFRQQTLKLLQKVQTLYKRNEEILTNRIKKRSGTNEVVGMSGAVLRGGTFRFKGNLYFRDADGRSCPNNEDYERRSSYEMFPTDFDMRSKHVWTVLDKKNIVMGVKQQLLEQAAFRPKCSSKVRGRKRKAIDLHQHSVEELLSEAEPKFSIDWNQISTLDLECRHSAYSCEAMWLVYMQPKIKRDEWTAEEDQILVAVARKNKMQNWIAIASKVDGRTDYQCFVRLQAELRYKLEPTYAKKWCHQDSERLRELVLKNTLNGVVNWSQVGQHFPNRARSTLIARYVYTLSPNISHAPFTEKEDILLYAAAKEYDGKFNRFPLTLFPNRSLAQLRTRYQNVLAQRNKTDSWSVKDDENLMKFISKHGTSQWVNCAKHLGNHTRTSCRTRFLVIKRFLEKHPNATEADLPRRKSCKNDLVNPETWELCLQEMQSDPDAEFVSSVSNELLVHSPAHNNNNSKISSIKDENYENWDVCSLDSKAEELPSPVRKTMGTFDKRVYEYFMYAYNLNLRSPAMKIPLPKNQNNLQGMASALCFRLTSRKRILINSACLPKQLNFCHNIALCQLPPSDESKTATKLVPPNWSTMMGFRAMCILSMRQPINFNDVSNPENSYHESQPELQLFRQRLRTLFYRTTLLSRLEVANFKELPNVLMKLSGSIVTDDLVNTSDSDDDDEACE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01321120;
- 90% Identity
- -
- 80% Identity
- -